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00028 #ifdef HAVE_CONFIG_H
00029 #include <config.h>
00030 #endif
00031
00032
00033
00034
00035
00036 #include "crires_recipe.h"
00037
00038 #include "crires_model_kernel.h"
00039 #include "crires_combine.h"
00040 #include "crires_extract.h"
00041 #include "crires_photom.h"
00042 #include "crires_wlcalib.h"
00043
00044
00045
00046
00047
00048 #define RECIPE_STRING "crires_spec_astro"
00049
00050
00051
00052
00053
00054 static int crires_spec_astro_compare(const cpl_frame *, const cpl_frame *) ;
00055 static cpl_imagelist ** crires_spec_astro_reduce(cpl_frameset *,
00056 const char *, const char *, const char *, const char *, const char *,
00057 const char *, const char *, const char *, cpl_imagelist **,
00058 cpl_imagelist **, cpl_imagelist **, cpl_imagelist **,
00059 cpl_table **, cpl_table **, cpl_table **, cpl_table **) ;
00060 static int crires_spec_astro_save(const cpl_imagelist **,
00061 const cpl_imagelist *, const cpl_imagelist *, const cpl_table **,
00062 const cpl_imagelist *, const cpl_imagelist *, int,
00063 const cpl_frameset *, const cpl_parameterlist *, cpl_frameset *) ;
00064
00065 static char crires_spec_astro_description[] =
00066 "crires_spec_astro -- Astrometry recipe\n"
00067 "The files listed in the Set Of Frames (sof-file) must be tagged:\n"
00068 "raw-file.fits "CRIRES_SPEC_ASTRO_RAW" or\n"
00069 "flat-file.fits "CRIRES_CALPRO_FLAT" or\n"
00070 "bpm-file.fits "CRIRES_CALPRO_BPM" or\n"
00071 "dark-file.fits "CRIRES_CALPRO_DARK" or\n"
00072 "detlin-file.fits "CRIRES_CALPRO_COEFFS_CUBE" or\n"
00073 "wavecal-file.fits "CRIRES_CALPRO_WAVE" or\n"
00074 "catalog-file.fits "CRIRES_CALPRO_OH_CAT" or\n"
00075 "catalog-file.fits "CRIRES_CALPRO_HITRAN_CAT" or\n"
00076 "model-config-file.fits "CRIRES_CALPRO_MODEL_CONFIG".\n"
00077 "\n"
00078 "The input data set is a series of nodding observations using different\n"
00079 " derotator position angles. The data are reduced separately for each\n"
00080 " of those positions. In order not to degrade the instrument high\n"
00081 " resolution, the combined images using only NODA or NODB nodding\n"
00082 " positions can be produced on request. (see --onlyA/B)\n"
00083 " In this case, the following spectrum extraction can be applied \n"
00084 " either on the usual combined image or on those NODA/B combined\n"
00085 " images (see --comb_used).\n"
00086 "\n"
00087 "This recipe produces 6 to 11 files per rotation angle:\n"
00088 " The combined image (PRO TYPE = "CRIRES_PROTYPE_COMBINED")\n"
00089 " The contribution map (PRO TYPE = "CRIRES_PROTYPE_CONTRIB")\n"
00090 " The combined image using only Nodding A frames (optional)\n"
00091 " (PRO TYPE = "CRIRES_PROTYPE_COMBINED")\n"
00092 " The contribution map using only Nodding A frames (optional)\n"
00093 " (PRO TYPE = "CRIRES_PROTYPE_CONTRIB")\n"
00094 " The combined image using only Nodding B frames (optional)\n"
00095 " (PRO TYPE = "CRIRES_PROTYPE_COMBINED")\n"
00096 " The contribution map using only Nodding B frames (optional)\n"
00097 " (PRO TYPE = "CRIRES_PROTYPE_CONTRIB")\n"
00098 " The table with the extracted spectrum\n"
00099 " (PRO TYPE = "CRIRES_PROTYPE_SPEC_WL")\n"
00100 " The profile image (PRO TYPE = "CRIRES_PROTYPE_PROFILE")\n"
00101 " The background map (PRO TYPE = "CRIRES_PROTYPE_BGD_MAP")\n"
00102 " The wavelength map (PRO TYPE = "CRIRES_PROTYPE_WL_MAP")\n"
00103 " The wavelength map from the model (optional)\n"
00104 " (PRO TYPE = "CRIRES_PROTYPE_WL_MAP")\n" ;
00105
00106 CRIRES_RECIPE_DEFINE(crires_spec_astro,
00107 CRIRES_PARAM_WAVES |
00108 CRIRES_PARAM_DISPLAY |
00109 CRIRES_PARAM_REFINE |
00110 CRIRES_PARAM_ONLYA |
00111 CRIRES_PARAM_ONLYB |
00112 CRIRES_PARAM_COMB_USED |
00113 CRIRES_PARAM_BLIND |
00114 CRIRES_PARAM_HOR_SIZE |
00115 CRIRES_PARAM_SPEC_HSIZE |
00116 CRIRES_PARAM_KAPPA |
00117 CRIRES_PARAM_CLOSING_HSIZE |
00118 CRIRES_PARAM_CLEAN_RATE |
00119 CRIRES_PARAM_REJECT |
00120 CRIRES_PARAM_SPEC_ZONE |
00121 CRIRES_PARAM_WL_ERROR |
00122 CRIRES_PARAM_XC_LIMIT |
00123 CRIRES_PARAM_WL_LOG |
00124 CRIRES_PARAM_WL_NOLIMIT |
00125 CRIRES_PARAM_WL_NBSAMPLES |
00126 CRIRES_PARAM_Y_POS_CHIP1 |
00127 CRIRES_PARAM_Y_POS_CHIP2 |
00128 CRIRES_PARAM_Y_POS_CHIP3 |
00129 CRIRES_PARAM_Y_POS_CHIP4 |
00130 CRIRES_PARAM_Y_WIDTH |
00131 CRIRES_PARAM_DEGREE |
00132 CRIRES_PARAM_WL_CLEAN,
00133 "Astrometry recipe",
00134 crires_spec_astro_description) ;
00135
00136
00137
00138
00139
00140 static struct {
00141
00142 int comb_blind ;
00143 int comb_refine ;
00144 int comb_onlyA ;
00145 int comb_onlyB ;
00146 crires_comb_method comb_used ;
00147 double wstart[CRIRES_NB_DETECTORS] ;
00148 double wstop[CRIRES_NB_DETECTORS] ;
00149 int wl_nolimit ;
00150 int wl_log ;
00151 const char * wl_ypos_c1 ;
00152 const char * wl_ypos_c2 ;
00153 const char * wl_ypos_c3 ;
00154 const char * wl_ypos_c4 ;
00155 int wl_width ;
00156 double wl_fwhm ;
00157 double wl_slitw ;
00158 int wl_degree ;
00159 double wl_err ;
00160 int wl_samples ;
00161 int wl_clean ;
00162 double wl_xclimit ;
00163 int wl_ppm ;
00164 int extr_box_hor_size ;
00165 int extr_spec_hsize ;
00166 double extr_kappa ;
00167 int extr_closing_hs ;
00168 int extr_clean_rate ;
00169 int extr_rej_left ;
00170 int extr_rej_right ;
00171 int extr_spec_starty ;
00172 int extr_spec_stopy ;
00173 int display ;
00174
00175 crires_illum_period period ;
00176 int qc_specpos[CRIRES_NB_DETECTORS] ;
00177 int qc_specwrec[CRIRES_NB_DETECTORS] ;
00178 int qc_specwopt[CRIRES_NB_DETECTORS] ;
00179 double qc_specoptmed[CRIRES_NB_DETECTORS] ;
00180 double qc_s2nmed[CRIRES_NB_DETECTORS] ;
00181 double qc_wlxc[CRIRES_NB_DETECTORS] ;
00182 double qc_wlcent[CRIRES_NB_DETECTORS] ;
00183 double qc_wldisp[CRIRES_NB_DETECTORS] ;
00184 double qc_fwhm_comb_pix[CRIRES_NB_DETECTORS] ;
00185 double qc_fwhm_comb_as[CRIRES_NB_DETECTORS] ;
00186 double qc_fwhm_prof_pix[CRIRES_NB_DETECTORS] ;
00187 double qc_fwhm_prof_as[CRIRES_NB_DETECTORS] ;
00188 double qc_fwhm_diff[CRIRES_NB_DETECTORS] ;
00189 } crires_spec_astro_config ;
00190
00191
00192
00193
00194
00195
00202
00203 static int crires_spec_astro(
00204 cpl_frameset * frameset,
00205 const cpl_parameterlist * parlist)
00206 {
00207 cpl_frameset * raw_one ;
00208 const char * sval ;
00209 cpl_frameset * rawframes ;
00210 const char * flat ;
00211 const char * dark ;
00212 const char * bpm ;
00213 const char * detlin ;
00214 const char * wavecal ;
00215 const char * oh_cat ;
00216 const char * hitran_cat ;
00217 const char * cfg_model ;
00218 cpl_size * labels ;
00219 cpl_size nlabels ;
00220 cpl_imagelist ** comblist ;
00221 cpl_table * extr_tab[CRIRES_NB_DETECTORS] ;
00222 cpl_imagelist * prof_list ;
00223 cpl_imagelist * bgmap_list ;
00224 cpl_imagelist * wl_map ;
00225 cpl_imagelist * wl_map_model ;
00226 int i, j ;
00227
00228
00229 rawframes = NULL ;
00230 crires_spec_astro_config.wl_ppm = 0 ;
00231 crires_spec_astro_config.wl_slitw = 2.0 ;
00232 crires_spec_astro_config.wl_fwhm = 2.0 ;
00233
00234
00235 crires_spec_astro_config.display = crires_parameterlist_get_int(parlist,
00236 RECIPE_STRING, CRIRES_PARAM_DISPLAY) ;
00237 crires_spec_astro_config.comb_refine = crires_parameterlist_get_bool(
00238 parlist, RECIPE_STRING, CRIRES_PARAM_REFINE) ;
00239 crires_spec_astro_config.comb_onlyA = crires_parameterlist_get_bool(
00240 parlist, RECIPE_STRING, CRIRES_PARAM_ONLYA) ;
00241 crires_spec_astro_config.comb_onlyB = crires_parameterlist_get_bool(
00242 parlist, RECIPE_STRING, CRIRES_PARAM_ONLYB) ;
00243 sval = crires_parameterlist_get_string(parlist, RECIPE_STRING,
00244 CRIRES_PARAM_COMB_USED) ;
00245 if (!strcmp(sval, "NODA"))
00246 crires_spec_astro_config.comb_used = CRIRES_COMB_METHOD_NODA ;
00247 else if (!strcmp(sval, "NODB"))
00248 crires_spec_astro_config.comb_used = CRIRES_COMB_METHOD_NODB ;
00249 else if (!strcmp(sval, "COMB"))
00250 crires_spec_astro_config.comb_used = CRIRES_COMB_METHOD_COMB ;
00251 else {
00252 cpl_msg_error(__func__, "Invalid combination method specified");
00253 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00254 return -1;
00255 }
00256 crires_spec_astro_config.comb_blind = crires_parameterlist_get_bool(
00257 parlist, RECIPE_STRING, CRIRES_PARAM_BLIND) ;
00258 sval = crires_parameterlist_get_string(parlist, RECIPE_STRING,
00259 CRIRES_PARAM_WAVES) ;
00260 if (sscanf(sval, "%lg,%lg,%lg,%lg,%lg,%lg,%lg,%lg",
00261 &crires_spec_astro_config.wstart[0],
00262 &crires_spec_astro_config.wstop[0],
00263 &crires_spec_astro_config.wstart[1],
00264 &crires_spec_astro_config.wstop[1],
00265 &crires_spec_astro_config.wstart[2],
00266 &crires_spec_astro_config.wstop[2],
00267 &crires_spec_astro_config.wstart[3],
00268 &crires_spec_astro_config.wstop[3])!=2*CRIRES_NB_DETECTORS){
00269 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00270 return -1 ;
00271 }
00272 crires_spec_astro_config.wl_log = crires_parameterlist_get_bool(parlist,
00273 RECIPE_STRING, CRIRES_PARAM_WL_LOG) ;
00274 crires_spec_astro_config.wl_nolimit = crires_parameterlist_get_bool(
00275 parlist, RECIPE_STRING, CRIRES_PARAM_WL_NOLIMIT) ;
00276 crires_spec_astro_config.wl_degree = crires_parameterlist_get_int(parlist,
00277 RECIPE_STRING, CRIRES_PARAM_DEGREE) ;
00278 crires_spec_astro_config.wl_err = crires_parameterlist_get_double(parlist,
00279 RECIPE_STRING, CRIRES_PARAM_WL_ERROR) ;
00280 crires_spec_astro_config.wl_xclimit = crires_parameterlist_get_double(
00281 parlist, RECIPE_STRING, CRIRES_PARAM_XC_LIMIT) ;
00282 crires_spec_astro_config.wl_samples = crires_parameterlist_get_int(parlist,
00283 RECIPE_STRING, CRIRES_PARAM_WL_NBSAMPLES) ;
00284 crires_spec_astro_config.wl_clean = crires_parameterlist_get_bool(parlist,
00285 RECIPE_STRING, CRIRES_PARAM_WL_CLEAN) ;
00286 crires_spec_astro_config.wl_ypos_c1=(char*)crires_parameterlist_get_string(
00287 parlist, RECIPE_STRING, CRIRES_PARAM_Y_POS_CHIP1) ;
00288 crires_spec_astro_config.wl_ypos_c2=(char*)crires_parameterlist_get_string(
00289 parlist, RECIPE_STRING, CRIRES_PARAM_Y_POS_CHIP2) ;
00290 crires_spec_astro_config.wl_ypos_c3=(char*)crires_parameterlist_get_string(
00291 parlist, RECIPE_STRING, CRIRES_PARAM_Y_POS_CHIP3) ;
00292 crires_spec_astro_config.wl_ypos_c4=(char*)crires_parameterlist_get_string(
00293 parlist, RECIPE_STRING, CRIRES_PARAM_Y_POS_CHIP4) ;
00294 crires_spec_astro_config.wl_width= crires_parameterlist_get_int(parlist,
00295 RECIPE_STRING, CRIRES_PARAM_Y_WIDTH) ;
00296 crires_spec_astro_config.extr_box_hor_size = crires_parameterlist_get_int(
00297 parlist, RECIPE_STRING, CRIRES_PARAM_HOR_SIZE) ;
00298 crires_spec_astro_config.extr_spec_hsize = crires_parameterlist_get_int(
00299 parlist, RECIPE_STRING, CRIRES_PARAM_SPEC_HSIZE) ;
00300 crires_spec_astro_config.extr_kappa = crires_parameterlist_get_double(
00301 parlist, RECIPE_STRING, CRIRES_PARAM_KAPPA) ;
00302 crires_spec_astro_config.extr_closing_hs = crires_parameterlist_get_int(
00303 parlist, RECIPE_STRING, CRIRES_PARAM_CLOSING_HSIZE) ;
00304 crires_spec_astro_config.extr_clean_rate = crires_parameterlist_get_double(
00305 parlist, RECIPE_STRING, CRIRES_PARAM_CLEAN_RATE) ;
00306 sval = crires_parameterlist_get_string(parlist, RECIPE_STRING,
00307 CRIRES_PARAM_REJECT) ;
00308 if (sscanf(sval, "%d,%d",
00309 &crires_spec_astro_config.extr_rej_left,
00310 &crires_spec_astro_config.extr_rej_right)!=2) {
00311 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00312 return -1 ;
00313 }
00314 sval = crires_parameterlist_get_string(parlist, RECIPE_STRING,
00315 CRIRES_PARAM_SPEC_ZONE) ;
00316 if (sscanf(sval, "%d,%d",
00317 &crires_spec_astro_config.extr_spec_starty,
00318 &crires_spec_astro_config.extr_spec_stopy)!=2) {
00319 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00320 return -1 ;
00321 }
00322
00323
00324 if (crires_dfs_set_groups(frameset, "crires_spec_astro")) {
00325 cpl_msg_error(__func__, "Cannot identify RAW and CALIB frames") ;
00326 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00327 return -1 ;
00328 }
00329
00330
00331 flat = crires_extract_filename(frameset, CRIRES_CALPRO_FLAT) ;
00332 dark = crires_extract_filename(frameset, CRIRES_CALPRO_DARK) ;
00333 bpm = crires_extract_filename(frameset, CRIRES_CALPRO_BPM) ;
00334 detlin = crires_extract_filename(frameset, CRIRES_CALPRO_COEFFS_CUBE) ;
00335 wavecal = crires_extract_filename(frameset, CRIRES_CALPRO_WAVE) ;
00336 oh_cat = crires_extract_filename(frameset, CRIRES_CALPRO_OH_CAT) ;
00337 hitran_cat = crires_extract_filename(frameset, CRIRES_CALPRO_HITRAN_CAT) ;
00338 cfg_model = crires_extract_filename(frameset, CRIRES_CALPRO_MODEL_CONFIG);
00339
00340
00341 if ((rawframes = crires_extract_frameset(frameset,
00342 CRIRES_SPEC_ASTRO_RAW)) == NULL) {
00343 cpl_msg_error(__func__, "No raw frame in input") ;
00344 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00345 return -1 ;
00346 }
00347
00348
00349 if ((crires_spec_astro_config.comb_used == CRIRES_COMB_METHOD_NODA)
00350 && (crires_spec_astro_config.comb_onlyA == 0)) {
00351 cpl_msg_warning(__func__,
00352 "You forgot to require the NODA image to be produced !") ;
00353 crires_spec_astro_config.comb_onlyA = 1 ;
00354 }
00355 if ((crires_spec_astro_config.comb_used == CRIRES_COMB_METHOD_NODB)
00356 && (crires_spec_astro_config.comb_onlyB == 0)) {
00357 cpl_msg_warning(__func__,
00358 "You forgot to require the NODB image to be produced !") ;
00359 crires_spec_astro_config.comb_onlyB = 1 ;
00360 }
00361
00362
00363 crires_spec_astro_config.period =
00364 crires_get_detector_illum_period(
00365 cpl_frame_get_filename(cpl_frameset_get_frame(rawframes, 0))) ;
00366 if (crires_spec_astro_config.period == CRIRES_ILLUM_UNKNOWN) {
00367 cpl_msg_error(__func__,
00368 "Cannot determine the detector illumination period") ;
00369 cpl_frameset_delete(rawframes) ;
00370 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00371 return -1 ;
00372 } else {
00373 crires_display_detector_illum(crires_spec_astro_config.period) ;
00374 }
00375
00376
00377 if ((labels = cpl_frameset_labelise(rawframes, crires_spec_astro_compare,
00378 &nlabels)) == NULL) {
00379 cpl_msg_error(__func__, "Cannot labelise input frames") ;
00380 cpl_frameset_delete(rawframes) ;
00381 cpl_error_set(__func__, CPL_ERROR_ILLEGAL_INPUT) ;
00382 return -1 ;
00383 }
00384
00385
00386 for (i=0 ; i<(int)nlabels ; i++) {
00387
00388
00389 for (j=0 ; j<CRIRES_NB_DETECTORS ; j++) {
00390 crires_spec_astro_config.qc_specpos[j] = -1 ;
00391 crires_spec_astro_config.qc_specwrec[j] = -1 ;
00392 crires_spec_astro_config.qc_specwopt[j] = -1 ;
00393 crires_spec_astro_config.qc_specoptmed[j] = -1.0 ;
00394 crires_spec_astro_config.qc_s2nmed[j] = -1.0 ;
00395 crires_spec_astro_config.qc_wlxc[j] = -1.0 ;
00396 crires_spec_astro_config.qc_wlcent[j] = -1.0 ;
00397 crires_spec_astro_config.qc_wldisp[j] = -1.0 ;
00398 crires_spec_astro_config.qc_fwhm_comb_pix[j] = -1.0 ;
00399 crires_spec_astro_config.qc_fwhm_comb_as[j] = -1.0 ;
00400 crires_spec_astro_config.qc_fwhm_prof_pix[j] = -1.0 ;
00401 crires_spec_astro_config.qc_fwhm_prof_as[j] = -1.0 ;
00402 crires_spec_astro_config.qc_fwhm_diff[j] = -1.0 ;
00403 }
00404
00405
00406 raw_one = cpl_frameset_extract(rawframes, labels, (cpl_size)i) ;
00407
00408
00409 cpl_msg_info(__func__, "Reduce data set %d / %"CPL_SIZE_FORMAT,
00410 i+1, nlabels);
00411 cpl_msg_indent_more() ;
00412
00413
00414 if ((comblist = crires_spec_astro_reduce(raw_one, flat, dark, bpm,
00415 detlin, wavecal, oh_cat, hitran_cat, cfg_model,
00416 &wl_map,
00417 &wl_map_model,
00418 &prof_list,
00419 &bgmap_list,
00420 &(extr_tab[0]),
00421 &(extr_tab[1]),
00422 &(extr_tab[2]),
00423 &(extr_tab[3]))) == NULL) {
00424 cpl_msg_error(__func__, "Cannot reduce setting") ;
00425 cpl_frameset_delete(rawframes) ;
00426 cpl_frameset_delete(raw_one) ;
00427 cpl_free(labels) ;
00428 cpl_msg_indent_less() ;
00429 return -1 ;
00430 }
00431
00432
00433 cpl_msg_info(__func__, "Save the products") ;
00434 cpl_msg_indent_more() ;
00435 if (crires_spec_astro_save((const cpl_imagelist **)comblist,
00436 prof_list, bgmap_list,
00437 (const cpl_table **)extr_tab, wl_map, wl_map_model,
00438 i+1, raw_one, parlist, frameset)) {
00439 cpl_msg_error(__func__, "Cannot save the product") ;
00440 cpl_imagelist_delete(comblist[0]) ;
00441 cpl_imagelist_delete(comblist[1]) ;
00442 if (crires_spec_astro_config.comb_onlyA) {
00443 cpl_imagelist_delete(comblist[2]) ;
00444 cpl_imagelist_delete(comblist[3]) ;
00445 }
00446 if (crires_spec_astro_config.comb_onlyB) {
00447 cpl_imagelist_delete(comblist[4]) ;
00448 cpl_imagelist_delete(comblist[5]) ;
00449 }
00450 cpl_free(comblist) ;
00451 cpl_imagelist_delete(prof_list) ;
00452 cpl_imagelist_delete(bgmap_list) ;
00453 for (j=0 ; j<CRIRES_NB_DETECTORS ; j++)
00454 if (extr_tab[j] != NULL) cpl_table_delete(extr_tab[j]) ;
00455 cpl_imagelist_delete(wl_map) ;
00456 if (wl_map_model) cpl_imagelist_delete(wl_map_model) ;
00457 cpl_frameset_delete(raw_one) ;
00458 cpl_frameset_delete(rawframes) ;
00459 cpl_free(labels) ;
00460 cpl_msg_indent_less() ;
00461 return -1 ;
00462 }
00463 cpl_imagelist_delete(comblist[0]) ;
00464 cpl_imagelist_delete(comblist[1]) ;
00465 if (crires_spec_astro_config.comb_onlyA) {
00466 cpl_imagelist_delete(comblist[2]) ;
00467 cpl_imagelist_delete(comblist[3]) ;
00468 }
00469 if (crires_spec_astro_config.comb_onlyB) {
00470 cpl_imagelist_delete(comblist[4]) ;
00471 cpl_imagelist_delete(comblist[5]) ;
00472 }
00473 cpl_free(comblist) ;
00474 cpl_imagelist_delete(prof_list) ;
00475 cpl_imagelist_delete(bgmap_list) ;
00476 for (j=0 ; j<CRIRES_NB_DETECTORS ; j++)
00477 if (extr_tab[j] != NULL) cpl_table_delete(extr_tab[j]) ;
00478 cpl_imagelist_delete(wl_map) ;
00479 if (wl_map_model) cpl_imagelist_delete(wl_map_model) ;
00480 cpl_frameset_delete(raw_one) ;
00481 cpl_msg_indent_less() ;
00482 }
00483 cpl_frameset_delete(rawframes) ;
00484 cpl_free(labels) ;
00485
00486
00487
00488
00489
00490
00491
00492 if (cpl_error_get_code()) return -1 ;
00493 else return 0 ;
00494 }
00495
00496
00501
00502 static cpl_imagelist ** crires_spec_astro_reduce(
00503 cpl_frameset * rawframes,
00504 const char * flat,
00505 const char * dark,
00506 const char * bpm,
00507 const char * detlin,
00508 const char * wavecal,
00509 const char * oh_cat,
00510 const char * hitran_cat,
00511 const char * cfg_model,
00512 cpl_imagelist ** wl_map,
00513 cpl_imagelist ** wl_map_model,
00514 cpl_imagelist ** prof_list,
00515 cpl_imagelist ** bgmap_list,
00516 cpl_table ** extr_tab1,
00517 cpl_table ** extr_tab2,
00518 cpl_table ** extr_tab3,
00519 cpl_table ** extr_tab4)
00520 {
00521 cpl_frame * fr ;
00522 const char * fname ;
00523 const char * wl_ypos ;
00524 cpl_propertylist * plist ;
00525 double wmin, wmax ;
00526 double tot_ndit ;
00527 cpl_imagelist ** comblist ;
00528 int comblist_offset ;
00529 cpl_table * wave_tab[CRIRES_NB_DETECTORS] ;
00530 cpl_image * profiles[CRIRES_NB_DETECTORS] ;
00531 cpl_image * bg_maps[CRIRES_NB_DETECTORS] ;
00532 cpl_imagelist * wl_map_loc ;
00533 cpl_imagelist * wl_map_model_loc ;
00534 cpl_imagelist * prof_list_loc ;
00535 cpl_imagelist * bgmap_list_loc ;
00536 cpl_table * extr_tab[CRIRES_NB_DETECTORS] ;
00537 cpl_vector ** wavelengths ;
00538 cpl_vector * wave_ypos ;
00539 int pix ;
00540 int i, j ;
00541
00542
00543 if (crires_spec_astro_config.comb_used == CRIRES_COMB_METHOD_COMB)
00544 comblist_offset = 0 ;
00545 else if (crires_spec_astro_config.comb_used == CRIRES_COMB_METHOD_NODA)
00546 comblist_offset = 1 ;
00547 else if (crires_spec_astro_config.comb_used == CRIRES_COMB_METHOD_NODB)
00548 comblist_offset = 2 ;
00549
00550
00551 fr = cpl_frameset_get_frame(rawframes, 0);
00552 tot_ndit = crires_get_totndit(cpl_frame_get_filename(fr)) ;
00553 if (tot_ndit < 0) {
00554 cpl_msg_error(__func__, "Cannot get the total number of NDIT") ;
00555 return NULL ;
00556 }
00557 tot_ndit *= cpl_frameset_get_size(rawframes) ;
00558
00559
00560 cpl_msg_info(__func__, "Images combination") ;
00561 cpl_msg_indent_more() ;
00562 if ((comblist = crires_combine_imagelist(rawframes, NULL,
00563 crires_spec_astro_config.period,
00564 flat, dark, bpm, detlin, 1,
00565 crires_spec_astro_config.comb_blind,
00566 crires_spec_astro_config.comb_refine,
00567 crires_spec_astro_config.comb_onlyA,
00568 crires_spec_astro_config.comb_onlyB)) == NULL) {
00569 cpl_msg_error(__func__, "Cannot combine the images") ;
00570 cpl_msg_indent_less() ;
00571 return NULL ;
00572 }
00573 cpl_msg_indent_less() ;
00574
00575
00576 cpl_msg_info(__func__, "Spectrum extraction") ;
00577 cpl_msg_indent_more() ;
00578 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00579 cpl_msg_info(__func__, "Chip number %d extraction", i+1) ;
00580 cpl_msg_indent_more() ;
00581 if ((extr_tab[i] = crires_extract_spectrum(
00582 cpl_imagelist_get(comblist[0+2*comblist_offset], i),
00583 cpl_imagelist_get(comblist[1+2*comblist_offset], i),
00584 crires_spec_astro_config.extr_box_hor_size,
00585 crires_spec_astro_config.extr_spec_hsize,
00586 crires_spec_astro_config.extr_kappa,
00587 crires_spec_astro_config.extr_closing_hs,
00588 crires_spec_astro_config.extr_clean_rate,
00589 crires_spec_astro_config.extr_rej_left,
00590 crires_spec_astro_config.extr_rej_right,
00591 crires_spec_astro_config.extr_spec_starty,
00592 crires_spec_astro_config.extr_spec_stopy,
00593 i+1,
00594 tot_ndit,
00595 crires_spec_astro_config.period,
00596 &(crires_spec_astro_config.qc_specpos[i]),
00597 &(crires_spec_astro_config.qc_specwrec[i]),
00598 &(crires_spec_astro_config.qc_specwopt[i]),
00599 &(crires_spec_astro_config.qc_specoptmed[i]),
00600 &(crires_spec_astro_config.qc_s2nmed[i]),
00601 &(profiles[i]),
00602 &(bg_maps[i]))) == NULL) {
00603 cpl_msg_error(__func__, "Cannot extract the spectrum") ;
00604 cpl_msg_indent_less() ;
00605 cpl_msg_indent_less() ;
00606 for (j=0 ; j<i ; j++)
00607 cpl_table_delete(extr_tab[j]) ;
00608 for (j=0 ; j<i ; j++)
00609 cpl_image_delete(profiles[j]) ;
00610 for (j=0 ; j<i ; j++)
00611 cpl_image_delete(bg_maps[j]) ;
00612 cpl_imagelist_delete(comblist[0]) ;
00613 cpl_imagelist_delete(comblist[1]) ;
00614 if (crires_spec_astro_config.comb_onlyA) {
00615 cpl_imagelist_delete(comblist[2]) ;
00616 cpl_imagelist_delete(comblist[3]) ;
00617 }
00618 if (crires_spec_astro_config.comb_onlyB) {
00619 cpl_imagelist_delete(comblist[4]) ;
00620 cpl_imagelist_delete(comblist[5]) ;
00621 }
00622 cpl_free(comblist) ;
00623 return NULL ;
00624 }
00625 cpl_msg_info(__func__, "Chip number %d FWHM Computation", i+1) ;
00626 if (crires_extract_qc_fwhm(
00627 cpl_imagelist_get(comblist[0+2*comblist_offset], i),
00628 profiles[i],
00629 &(crires_spec_astro_config.qc_fwhm_comb_pix[i]),
00630 &(crires_spec_astro_config.qc_fwhm_comb_as[i]),
00631 &(crires_spec_astro_config.qc_fwhm_prof_pix[i]),
00632 &(crires_spec_astro_config.qc_fwhm_prof_as[i]),
00633 &(crires_spec_astro_config.qc_fwhm_diff[i])) == -1) {
00634 cpl_msg_warning(__func__, "Failed for FWHM computation") ;
00635 crires_spec_astro_config.qc_fwhm_comb_pix[i] = -1.0 ;
00636 crires_spec_astro_config.qc_fwhm_comb_as[i] = -1.0 ;
00637 crires_spec_astro_config.qc_fwhm_prof_pix[i] = -1.0 ;
00638 crires_spec_astro_config.qc_fwhm_prof_as[i] = -1.0 ;
00639 crires_spec_astro_config.qc_fwhm_diff[i] = -1.0 ;
00640 }
00641 cpl_msg_indent_less() ;
00642 }
00643
00644
00645 prof_list_loc = cpl_imagelist_new() ;
00646 bgmap_list_loc = cpl_imagelist_new() ;
00647 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00648 cpl_imagelist_set(prof_list_loc, profiles[i], i) ;
00649 cpl_imagelist_set(bgmap_list_loc, bg_maps[i], i) ;
00650 }
00651
00652
00653 for (i=1 ; i<CRIRES_NB_DETECTORS ; i++) {
00654 if (crires_spec_astro_config.qc_specpos[i-1] > 0 &&
00655 crires_spec_astro_config.qc_specpos[i] > 0 &&
00656 fabs(crires_spec_astro_config.qc_specpos[i-1] -
00657 crires_spec_astro_config.qc_specpos[i]) >
00658 CRIRES_SPEC_POS_TOLERANCE) {
00659 cpl_msg_warning(__func__,
00660 "The spectrum positions in chip %d and chip %d are too different: %d -> %d",
00661 i, i+1, crires_spec_astro_config.qc_specpos[i-1],
00662 crires_spec_astro_config.qc_specpos[i]) ;
00663 }
00664 }
00665 cpl_msg_indent_less() ;
00666
00667
00668 cpl_msg_info(__func__, "Wavelength Calibration") ;
00669 cpl_msg_indent_more() ;
00670 if (wavecal != NULL) {
00671
00672 cpl_msg_info(__func__, "Use the provided solution") ;
00673 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00674 if ((wave_tab[i] = crires_load_table_check(wavecal, i+1,
00675 CRIRES_PROTYPE_WL_POLY, -1, -1, 0)) == NULL) {
00676 cpl_msg_error(__func__, "Cannot load the wavelength table") ;
00677 cpl_msg_indent_less() ;
00678 cpl_imagelist_delete(comblist[0]) ;
00679 cpl_imagelist_delete(comblist[1]) ;
00680 if (crires_spec_astro_config.comb_onlyA) {
00681 cpl_imagelist_delete(comblist[2]) ;
00682 cpl_imagelist_delete(comblist[3]) ;
00683 }
00684 if (crires_spec_astro_config.comb_onlyB) {
00685 cpl_imagelist_delete(comblist[4]) ;
00686 cpl_imagelist_delete(comblist[5]) ;
00687 }
00688 cpl_free(comblist) ;
00689 cpl_imagelist_delete(prof_list_loc) ;
00690 cpl_imagelist_delete(bgmap_list_loc) ;
00691 for (j=0 ; j<CRIRES_NB_DETECTORS ; j++)
00692 cpl_table_delete(extr_tab[j]) ;
00693 return NULL ;
00694 }
00695 }
00696 } else {
00697
00698 cpl_msg_info(__func__, "Use the science frame sky to calibrate") ;
00699
00700
00701 fname = cpl_frame_get_filename(cpl_frameset_get_frame(rawframes,0)) ;
00702
00703
00704 if (crires_spec_astro_config.wl_nolimit == 0) {
00705 plist = cpl_propertylist_load(fname, 0) ;
00706 wmin = crires_pfits_get_wlen_min(plist) ;
00707 wmax = crires_pfits_get_wlen_max(plist) ;
00708 cpl_propertylist_delete(plist) ;
00709 if (cpl_error_get_code()) {
00710 wmin = wmax = -1.0 ;
00711 cpl_error_reset() ;
00712 }
00713 } else {
00714 wmin = wmax = -1.0 ;
00715 }
00716
00717
00718 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00719 cpl_msg_info(__func__, "Calibrate chip number %d", i+1) ;
00720 cpl_msg_indent_more() ;
00721
00722
00723 if (i+1 == 1) wl_ypos = crires_spec_astro_config.wl_ypos_c1 ;
00724 if (i+1 == 2) wl_ypos = crires_spec_astro_config.wl_ypos_c2 ;
00725 if (i+1 == 3) wl_ypos = crires_spec_astro_config.wl_ypos_c3 ;
00726 if (i+1 == 4) wl_ypos = crires_spec_astro_config.wl_ypos_c4 ;
00727
00728 if (!strcmp(wl_ypos, "")) {
00729
00730 wave_ypos = cpl_vector_new(1) ;
00731 cpl_vector_set(wave_ypos, 0,
00732 (double)(crires_spec_astro_config.qc_specpos[i])) ;
00733 } else {
00734 if ((wave_ypos = crires_parse_y_positions(wl_ypos)) == NULL) {
00735 cpl_msg_error(__func__,
00736 "Cannot parse the y_pos value : %s - use %d",
00737 wl_ypos, crires_spec_astro_config.qc_specpos[i]) ;
00738 wave_ypos = cpl_vector_new(1) ;
00739 cpl_vector_set(wave_ypos, 0,
00740 (double)(crires_spec_astro_config.qc_specpos[i])) ;
00741 }
00742 }
00743
00744
00745 wave_tab[i] = crires_wlcalib_sky(fname,
00746 crires_spec_astro_config.period,
00747 oh_cat, hitran_cat, crires_spec_astro_config.wl_log,
00748 flat, dark, bpm, detlin,
00749 crires_spec_astro_config.wstart[i],
00750 crires_spec_astro_config.wstop[i],
00751 wmin, wmax, i+1,
00752 wave_ypos,
00753 crires_spec_astro_config.wl_width,
00754 crires_spec_astro_config.wl_degree,
00755 crires_spec_astro_config.wl_slitw,
00756 crires_spec_astro_config.wl_fwhm,
00757 crires_spec_astro_config.wl_err,
00758 crires_spec_astro_config.wl_samples,
00759 crires_spec_astro_config.wl_clean,
00760 crires_spec_astro_config.wl_xclimit,
00761 crires_spec_astro_config.wl_ppm,
00762 (i+1==crires_spec_astro_config.display)) ;
00763 cpl_msg_indent_less() ;
00764
00765 cpl_vector_delete(wave_ypos) ;
00766 }
00767 }
00768
00769
00770 if ((wl_map_loc = crires_wlcalib_gen_wlmap((const cpl_table **)wave_tab))
00771 == NULL) {
00772 cpl_msg_error(__func__, "Cannot compute the Wavelength Map") ;
00773 cpl_imagelist_delete(comblist[0]) ;
00774 cpl_imagelist_delete(comblist[1]) ;
00775 if (crires_spec_astro_config.comb_onlyA) {
00776 cpl_imagelist_delete(comblist[2]) ;
00777 cpl_imagelist_delete(comblist[3]) ;
00778 }
00779 if (crires_spec_astro_config.comb_onlyB) {
00780 cpl_imagelist_delete(comblist[4]) ;
00781 cpl_imagelist_delete(comblist[5]) ;
00782 }
00783 cpl_free(comblist) ;
00784 cpl_imagelist_delete(prof_list_loc) ;
00785 cpl_imagelist_delete(bgmap_list_loc) ;
00786 for (j=0 ; j<CRIRES_NB_DETECTORS ; j++) {
00787 cpl_table_delete(extr_tab[j]) ;
00788 if (wave_tab[j] != NULL) cpl_table_delete(wave_tab[j]);
00789 }
00790 return NULL ;
00791 }
00792
00793
00794 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00795 crires_spec_astro_config.qc_wlcent[i] =
00796 cpl_image_get(cpl_imagelist_get(wl_map_loc, i),
00797 512, crires_spec_astro_config.qc_specpos[i], &pix) ;
00798 crires_spec_astro_config.qc_wldisp[i] =
00799 ((cpl_image_get(cpl_imagelist_get(wl_map_loc, i), 1024,
00800 crires_spec_astro_config.qc_specpos[i], &pix)) -
00801 (cpl_image_get(cpl_imagelist_get(wl_map_loc, i), 1,
00802 crires_spec_astro_config.qc_specpos[i], &pix)))
00803 / 1023 ;
00804 crires_spec_astro_config.qc_wlxc[i] =
00805 crires_wlcalib_get_better_xc(wave_tab[i]) ;
00806 }
00807 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++)
00808 if (wave_tab[i] != NULL) cpl_table_delete(wave_tab[i]);
00809
00810
00811 fname = cpl_frame_get_filename(cpl_frameset_get_frame(rawframes,0)) ;
00812 if ((cfg_model != NULL) && (!crires_model_off()) &&
00813 (crires_model_config_check(cfg_model, fname) == 0)) {
00814 cpl_msg_info(__func__, "Call the model to get the wavelength map") ;
00815 cpl_msg_indent_more() ;
00816 wl_map_model_loc = crires_model_wavpix(fname, cfg_model, -1) ;
00817 if (wl_map_model_loc == NULL) {
00818 cpl_msg_warning(__func__, "Model function returns NULL") ;
00819 cpl_error_reset() ;
00820 }
00821 cpl_msg_indent_less() ;
00822 } else {
00823 wl_map_model_loc = NULL ;
00824 }
00825
00826
00827 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00828 cpl_table_new_column(extr_tab[i], CRIRES_COL_WAVELENGTH,
00829 CPL_TYPE_DOUBLE) ;
00830 for (j=0 ; j<cpl_table_get_nrow(extr_tab[i]) ; j++) {
00831 cpl_table_set_double(extr_tab[i], CRIRES_COL_WAVELENGTH, j,
00832 cpl_image_get(cpl_imagelist_get_const(wl_map_loc, i), j+1,
00833 crires_spec_astro_config.qc_specpos[i], &pix));
00834 }
00835 }
00836
00837
00838 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00839 cpl_table_new_column(extr_tab[i], CRIRES_COL_WAVELENGTH_MODEL,
00840 CPL_TYPE_DOUBLE) ;
00841 cpl_table_fill_column_window_double(extr_tab[i],
00842 CRIRES_COL_WAVELENGTH_MODEL, 0,
00843 cpl_table_get_nrow(extr_tab[i]), -1.0) ;
00844 }
00845 if ((cfg_model != NULL) && (!crires_model_off()) && (1)) {
00846 cpl_msg_info(__func__, "Call the model to get the wavelengths") ;
00847 cpl_msg_indent_more() ;
00848 wavelengths = crires_model_wavelengths(
00849 cpl_frame_get_filename(cpl_frameset_get_frame(rawframes,0)),
00850 cfg_model, -1,
00851 (double)(crires_spec_astro_config.qc_specpos[0]),
00852 wl_map_model_loc) ;
00853 if (wavelengths != NULL) {
00854
00855 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00856
00857 for (j=0 ; j<cpl_vector_get_size(wavelengths[i]) ; j++) {
00858 cpl_table_set_double(extr_tab[i],
00859 CRIRES_COL_WAVELENGTH_MODEL, j,
00860 cpl_vector_get(wavelengths[i], j)) ;
00861 }
00862 }
00863 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++)
00864 cpl_vector_delete(wavelengths[i]) ;
00865 cpl_free(wavelengths) ;
00866 } else {
00867 cpl_msg_warning(__func__, "Model function returns NULL") ;
00868 cpl_error_reset() ;
00869 }
00870 cpl_msg_indent_less() ;
00871 }
00872
00873
00874 if (wl_map != NULL) *wl_map = wl_map_loc ;
00875 else cpl_imagelist_delete(wl_map_loc) ;
00876 if (wl_map_model != NULL) *wl_map_model = wl_map_model_loc ;
00877 else cpl_imagelist_delete(wl_map_model_loc) ;
00878 if (prof_list != NULL) *prof_list = prof_list_loc ;
00879 else cpl_imagelist_delete(prof_list_loc) ;
00880 if (bgmap_list != NULL) *bgmap_list = bgmap_list_loc ;
00881 else cpl_imagelist_delete(bgmap_list_loc) ;
00882 if (extr_tab1 != NULL) *extr_tab1 = extr_tab[0] ;
00883 else cpl_table_delete(extr_tab[0]) ;
00884 if (extr_tab2 != NULL) *extr_tab2 = extr_tab[1] ;
00885 else cpl_table_delete(extr_tab[1]) ;
00886 if (extr_tab3 != NULL) *extr_tab3 = extr_tab[2] ;
00887 else cpl_table_delete(extr_tab[2]) ;
00888 if (extr_tab4 != NULL) *extr_tab4 = extr_tab[3] ;
00889 else cpl_table_delete(extr_tab[3]) ;
00890 return comblist ;
00891 }
00892
00893
00909
00910 static int crires_spec_astro_save(
00911 const cpl_imagelist ** images,
00912 const cpl_imagelist * prof,
00913 const cpl_imagelist * bgmap,
00914 const cpl_table ** extr_tab,
00915 const cpl_imagelist * wl_map,
00916 const cpl_imagelist * wl_map_model,
00917 int setting,
00918 const cpl_frameset * cur_set,
00919 const cpl_parameterlist * parlist,
00920 cpl_frameset * set)
00921 {
00922 cpl_propertylist ** qclists ;
00923 const cpl_frame * ref_frame ;
00924 char * filename ;
00925 cpl_propertylist * inputlist ;
00926 const char * recipe_name = "crires_spec_astro" ;
00927 int i ;
00928
00929
00930 ref_frame = irplib_frameset_get_first_from_group(cur_set,
00931 CPL_FRAME_GROUP_RAW) ;
00932
00933
00934 qclists = cpl_malloc(CRIRES_NB_DETECTORS * sizeof(cpl_propertylist*)) ;
00935 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
00936 qclists[i] = cpl_propertylist_new() ;
00937 cpl_propertylist_append_int(qclists[i], "ESO QC SPECPOS",
00938 crires_spec_astro_config.qc_specpos[i]) ;
00939 cpl_propertylist_append_int(qclists[i], "ESO QC SPECWREC",
00940 crires_spec_astro_config.qc_specwrec[i]) ;
00941 cpl_propertylist_append_int(qclists[i], "ESO QC SPECWOPT",
00942 crires_spec_astro_config.qc_specwopt[i]) ;
00943 cpl_propertylist_append_double(qclists[i], "ESO QC SIGNAL MED",
00944 crires_spec_astro_config.qc_specoptmed[i]) ;
00945 cpl_propertylist_append_double(qclists[i], "ESO QC S2NMED",
00946 crires_spec_astro_config.qc_s2nmed[i]) ;
00947 cpl_propertylist_append_double(qclists[i], "ESO QC XCORR",
00948 crires_spec_astro_config.qc_wlxc[i]) ;
00949 cpl_propertylist_append_double(qclists[i], "ESO QC CENTWL",
00950 crires_spec_astro_config.qc_wlcent[i]) ;
00951 cpl_propertylist_append_double(qclists[i], "ESO QC DISPWL",
00952 crires_spec_astro_config.qc_wldisp[i]) ;
00953 cpl_propertylist_append_double(qclists[i], "ESO QC FWHMPIX COMBINED",
00954 crires_spec_astro_config.qc_fwhm_comb_pix[i]) ;
00955 cpl_propertylist_append_double(qclists[i], "ESO QC FWHMARC COMBINED",
00956 crires_spec_astro_config.qc_fwhm_comb_as[i]) ;
00957 cpl_propertylist_append_double(qclists[i], "ESO QC FWHMPIX PROFILE",
00958 crires_spec_astro_config.qc_fwhm_prof_pix[i]) ;
00959 cpl_propertylist_append_double(qclists[i], "ESO QC FWHMARC PROFILE",
00960 crires_spec_astro_config.qc_fwhm_prof_as[i]) ;
00961 cpl_propertylist_append_double(qclists[i], "ESO QC FWHM DIFF",
00962 crires_spec_astro_config.qc_fwhm_diff[i]) ;
00963
00964 inputlist = cpl_propertylist_load_regexp(
00965 cpl_frame_get_filename(ref_frame), i+1,
00966 CRIRES_HEADER_EXT_FORWARD, 0) ;
00967 cpl_propertylist_copy_property_regexp(qclists[i], inputlist,
00968 CRIRES_HEADER_EXT_FORWARD, 0) ;
00969 cpl_propertylist_delete(inputlist) ;
00970 }
00971
00972
00973 filename = cpl_sprintf("%s_comb_set%02d.fits", recipe_name, setting) ;
00974 crires_image_save(set,
00975 parlist,
00976 cur_set,
00977 images[0],
00978 recipe_name,
00979 CRIRES_ASTRO_COMBINED_IMA,
00980 CRIRES_PROTYPE_COMBINED,
00981 crires_spec_astro_config.period,
00982 NULL,
00983 (const cpl_propertylist **)qclists,
00984 PACKAGE "/" PACKAGE_VERSION,
00985 filename) ;
00986 cpl_free(filename) ;
00987
00988
00989 filename = cpl_sprintf("%s_contrib_set%02d.fits", recipe_name, setting) ;
00990 crires_image_save(set,
00991 parlist,
00992 cur_set,
00993 images[1],
00994 recipe_name,
00995 CRIRES_ASTRO_CONTRIBUTION_IMA,
00996 CRIRES_PROTYPE_CONTRIB,
00997 crires_spec_astro_config.period,
00998 NULL,
00999 (const cpl_propertylist **)qclists,
01000 PACKAGE "/" PACKAGE_VERSION,
01001 filename) ;
01002 cpl_free(filename) ;
01003
01004
01005 if (crires_spec_astro_config.comb_onlyA) {
01006
01007 filename = cpl_sprintf("%s_comb_noddedA_set%02d.fits",
01008 recipe_name, setting) ;
01009 crires_image_save(set,
01010 parlist,
01011 cur_set,
01012 images[2],
01013 recipe_name,
01014 CRIRES_ASTRO_COMBINED_IMA,
01015 CRIRES_PROTYPE_COMBINED,
01016 crires_spec_astro_config.period,
01017 NULL,
01018 (const cpl_propertylist **)qclists,
01019 PACKAGE "/" PACKAGE_VERSION,
01020 filename) ;
01021 cpl_free(filename) ;
01022
01023
01024 filename = cpl_sprintf("%s_contrib_noddedA_set%02d.fits",
01025 recipe_name, setting) ;
01026 crires_image_save(set,
01027 parlist,
01028 cur_set,
01029 images[3],
01030 recipe_name,
01031 CRIRES_ASTRO_CONTRIBUTION_IMA,
01032 CRIRES_PROTYPE_CONTRIB,
01033 crires_spec_astro_config.period,
01034 NULL,
01035 (const cpl_propertylist **)qclists,
01036 PACKAGE "/" PACKAGE_VERSION,
01037 filename) ;
01038 cpl_free(filename) ;
01039 }
01040
01041
01042 if (crires_spec_astro_config.comb_onlyB) {
01043
01044 filename = cpl_sprintf("%s_comb_noddedB_set%02d.fits",
01045 recipe_name, setting) ;
01046 crires_image_save(set,
01047 parlist,
01048 cur_set,
01049 images[4],
01050 recipe_name,
01051 CRIRES_ASTRO_COMBINED_IMA,
01052 CRIRES_PROTYPE_COMBINED,
01053 crires_spec_astro_config.period,
01054 NULL,
01055 (const cpl_propertylist **)qclists,
01056 PACKAGE "/" PACKAGE_VERSION,
01057 filename) ;
01058 cpl_free(filename) ;
01059
01060
01061 filename = cpl_sprintf("%s_contrib_noddedB_set%02d.fits",
01062 recipe_name, setting) ;
01063 crires_image_save(set,
01064 parlist,
01065 cur_set,
01066 images[5],
01067 recipe_name,
01068 CRIRES_ASTRO_CONTRIBUTION_IMA,
01069 CRIRES_PROTYPE_CONTRIB,
01070 crires_spec_astro_config.period,
01071 NULL,
01072 (const cpl_propertylist **)qclists,
01073 PACKAGE "/" PACKAGE_VERSION,
01074 filename) ;
01075 cpl_free(filename) ;
01076 }
01077
01078
01079 filename = cpl_sprintf("%s_prof_set%02d.fits", recipe_name, setting) ;
01080 crires_image_save(set,
01081 parlist,
01082 cur_set,
01083 prof,
01084 recipe_name,
01085 CRIRES_ASTRO_EXTRACT_PROFILE_IMA,
01086 CRIRES_PROTYPE_PROFILE,
01087 crires_spec_astro_config.period,
01088 NULL,
01089 (const cpl_propertylist **)qclists,
01090 PACKAGE "/" PACKAGE_VERSION,
01091 filename) ;
01092 cpl_free(filename) ;
01093
01094
01095 filename = cpl_sprintf("%s_bgmap_set%02d.fits", recipe_name, setting) ;
01096 crires_image_save(set,
01097 parlist,
01098 cur_set,
01099 bgmap,
01100 recipe_name,
01101 CRIRES_ASTRO_EXTRACT_BGMAP_IMA,
01102 CRIRES_PROTYPE_BGD_MAP,
01103 crires_spec_astro_config.period,
01104 NULL,
01105 (const cpl_propertylist **)qclists,
01106 PACKAGE "/" PACKAGE_VERSION,
01107 filename) ;
01108 cpl_free(filename) ;
01109
01110
01111 filename = cpl_sprintf("%s_wlmap_set%02d.fits", recipe_name, setting) ;
01112 crires_image_save(set,
01113 parlist,
01114 cur_set,
01115 wl_map,
01116 recipe_name,
01117 CRIRES_ASTRO_WL_MAP_IMA,
01118 CRIRES_PROTYPE_WL_MAP,
01119 crires_spec_astro_config.period,
01120 NULL,
01121 (const cpl_propertylist **)qclists,
01122 PACKAGE "/" PACKAGE_VERSION,
01123 filename) ;
01124 cpl_free(filename) ;
01125
01126 if (wl_map_model != NULL) {
01127
01128 filename = cpl_sprintf("%s_wlmap_model_set%02d.fits", recipe_name,
01129 setting) ;
01130 crires_image_save(set,
01131 parlist,
01132 cur_set,
01133 wl_map_model,
01134 recipe_name,
01135 CRIRES_ASTRO_WL_MAP_MODEL_IMA,
01136 CRIRES_PROTYPE_WL_MAP,
01137 crires_spec_astro_config.period,
01138 NULL,
01139 (const cpl_propertylist **)qclists,
01140 PACKAGE "/" PACKAGE_VERSION,
01141 filename) ;
01142 cpl_free(filename) ;
01143 }
01144
01145
01146 filename = cpl_sprintf("%s_extracted_set%02d.fits", recipe_name, setting);
01147 crires_table_save(set,
01148 parlist,
01149 cur_set,
01150 extr_tab,
01151 recipe_name,
01152 CRIRES_ASTRO_EXTRACT_WL_TAB,
01153 CRIRES_PROTYPE_SPEC_WL,
01154 NULL,
01155 (const cpl_propertylist **)qclists,
01156 PACKAGE "/" PACKAGE_VERSION,
01157 filename) ;
01158 cpl_free(filename) ;
01159
01160
01161 for (i=0 ; i<CRIRES_NB_DETECTORS ; i++) {
01162 cpl_propertylist_delete(qclists[i]) ;
01163 }
01164 cpl_free(qclists) ;
01165 return 0;
01166 }
01167
01168
01175
01176 static int crires_spec_astro_compare(
01177 const cpl_frame * frame1,
01178 const cpl_frame * frame2)
01179 {
01180 int comparison ;
01181 cpl_propertylist * plist1 ;
01182 cpl_propertylist * plist2 ;
01183 double dval1, dval2 ;
01184 int ival1, ival2 ;
01185
01186
01187 if (frame1==NULL || frame2==NULL) return -1 ;
01188
01189
01190 if ((plist1=cpl_propertylist_load(cpl_frame_get_filename(frame1),0))==NULL){
01191 cpl_msg_error(__func__, "getting header from reference frame");
01192 return -1 ;
01193 }
01194 if ((plist2=cpl_propertylist_load(cpl_frame_get_filename(frame2),0))==NULL){
01195 cpl_msg_error(__func__, "getting header from reference frame");
01196 cpl_propertylist_delete(plist1) ;
01197 return -1 ;
01198 }
01199
01200
01201 if (cpl_error_get_code()) {
01202 cpl_propertylist_delete(plist1) ;
01203 cpl_propertylist_delete(plist2) ;
01204 return -1 ;
01205 }
01206
01207 comparison = 1 ;
01208
01209
01210 dval1 = crires_pfits_get_dit(plist1) ;
01211 dval2 = crires_pfits_get_dit(plist2) ;
01212 if (cpl_error_get_code()) {
01213 cpl_msg_error(__func__, "Cannot get the POSANG");
01214 cpl_propertylist_delete(plist1) ;
01215 cpl_propertylist_delete(plist2) ;
01216 return -1 ;
01217 }
01218 if (fabs(dval1-dval2) > 1e-3) comparison = 0 ;
01219
01220
01221 ival1 = crires_pfits_get_expno(plist1) ;
01222 ival2 = crires_pfits_get_expno(plist2) ;
01223 if (cpl_error_get_code()) {
01224 cpl_msg_error(__func__, "Cannot get the EXPNO");
01225 cpl_propertylist_delete(plist1) ;
01226 cpl_propertylist_delete(plist2) ;
01227 return -1 ;
01228 }
01229 if (fabs(ival2-ival1) != 1.0) comparison = 0 ;
01230
01231 cpl_propertylist_delete(plist1) ;
01232 cpl_propertylist_delete(plist2) ;
01233 return comparison ;
01234 }