X-shooter Pipeline Reference Manual 3.8.15
Data Structures | Macros | Functions | Variables
xsh_model
Xshooter Recipes

Data Structures

struct  SimAnneal
 

Macros

#define RECIPE_ID   "xsh_model_compute"
 
#define RECIPE_AUTHOR   "P. Bristow"
 
#define RECIPE_CONTACT   "bristowp@eso.org"
 
#define RECIPE_ID   "xsh_util_guess_xy"
 
#define RECIPE_AUTHOR   "A.Modigliani, P. Bristow"
 
#define RECIPE_CONTACT   "amodigli@eso.org"
 
#define RECIPE_ID   "xsh_util_physmod"
 
#define RECIPE_AUTHOR   "A.Modigliani, P. Bristow"
 
#define RECIPE_CONTACT   "amodigli@eso.org"
 
#define uniform(a, b)   ( a + (b - a) * xsh_dr250() )
 
#define BIG_VAL   400000.0
 
#define BITS   31
 
#define WORD_BIT   32
 
#define MSB   0x40000000L
 
#define ALL_BITS   0x7fffffffL
 
#define HALF_RANGE   0x20000000L
 
#define STEP   7
 
#define ALL_BITS   0xffffffff
 
#define uniform(a, b)   ( a + (b - a) * xsh_dr250() )
 
#define HUGE   HUGE_VAL
 
#define PI   3.1415626536
 
#define PI2   (PI/2.0)
 

Functions

static int xsh_model_anneal_create (cpl_plugin *plugin)
 Setup the recipe options

 
static int xsh_model_anneal_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_model_anneal_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_model_anneal (cpl_parameterlist *parlist, cpl_frameset *frameset)
 Interpret the command line options and execute the data processing.
 
static int xsh_model_anneal_save (const cpl_table *out_table, cpl_parameterlist *parlist, cpl_frameset *set)
 Save the product of the recipe.
 
int cpl_plugin_get_info (cpl_pluginlist *list)
 Build the list of available plugins, for this module.
 
static int xsh_model_create (cpl_plugin *plugin)
 Setup the recipe options.
 
static int xsh_model_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_model_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_model (cpl_parameterlist *parlist, cpl_frameset *frameset)
 Interpret the command line options and execute the data processing.
 
static int xsh_model_reduce (const char *wave_list_file, const char *test_par_file)
 The actual model computation takes place here.
 
static int xsh_model_first_anneal_create (cpl_plugin *plugin)
 Setup the recipe options

 
static int xsh_model_first_anneal_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_model_first_anneal_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_util_genconfig_create (cpl_plugin *plugin)
 Setup the recipe options

 
static int xsh_util_genconfig_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_util_genconfig_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_util_genconfig (cpl_parameterlist *parlist, cpl_frameset *framelist)
 The FITS file creation occurs here.
 
static int xsh_util_genconfig_save (cpl_table *out_table, cpl_parameterlist *parlist, cpl_frameset *set)
 Save the product of the recipe.
 
static int xsh_util_guess_xy_create (cpl_plugin *plugin)
 Setup the recipe options

 
static int xsh_util_guess_xy_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_util_guess_xy_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_util_guess_xy (cpl_parameterlist *parameters, cpl_frameset *frameset)
 The FITS file creation occurs here.
 
static int xsh_util_physmod_create (cpl_plugin *plugin)
 Setup the recipe options

 
static int xsh_util_physmod_exec (cpl_plugin *plugin)
 Execute the plugin instance given by the interface.
 
static int xsh_util_physmod_destroy (cpl_plugin *plugin)
 Destroy what has been created by the 'create' function.
 
static int xsh_util_physmod (cpl_parameterlist *parameters, cpl_frameset *frameset)
 The FITS file creation occurs here.
 
void xsh_report_cpu (FILE *fp, char *str)
 
void get_cpu_time (double *usertime, double *systime)
 
void xsh_3_assign (int loc, double val)
 
void xsh_3_output_data (double *)
 
cpl_table * xsh_model_anneal_comp (ann_all_par *p_all_par, int nparam, double *abest, double *amin, double *amax, int *aname, struct xs_3 *p_xs_3, int DS_size, coord *msp_coord, DOUBLE *p_wlarray, DOUBLE **ref_ind, int maxit)
 Use the simulated annealing algorithm to adjust the model parameters so that the metric (mean Euclidean residual) is minimised.
 
float xsh_3_energy (double *a)
 
void xsh_r250_init (int sd)
 
unsigned int r250 (void)
 
double xsh_dr250 (void)
 
long xsh_set_seed (long int sd)
 
long get_seed (void)
 
unsigned long int xsh_randlcg (void)
 
static int equilibrate (float t, int n)
 
int xsh_SAInit (CostFunction f, int d)
 
void xsh_SAfree (void)
 
int xsh_SAiterations (int m)
 
int xsh_SAdwell (int m)
 
float xsh_SABoltzmann (float k)
 
float xsh_SAtemperature (float t)
 
float xsh_SAlearning_rate (float r)
 
float xsh_SAjump (float j)
 
float xsh_SArange (float r)
 
void xsh_SAinitial (double *xi)
 
void xsh_SAcurrent (double *xc)
 
void xsh_SAoptimum (double *xb)
 
float xsh_SAmelt (int iters)
 
float xsh_SAanneal (int iters)
 

Variables

static char xsh_model_anneal_description []
 
static char xsh_model_anneal_description_short []
 
static char xsh_model_compute_description_short [] = "Development Only"
 
static char xsh_model_compute_description []
 
static const int vectordim =4
 
static char xsh_model_first_anneal_description []
 
static char xsh_model_first_anneal_description_short []
 
static char xsh_util_genconfig_description []
 
static char xsh_util_guess_xy_description []
 
static char xsh_util_guess_xy_description_short [] ="Generate physical model guesses"
 
static char xsh_util_physmod_description []
 
static char xsh_util_physmod_description_short [] ="Generate physical model products"
 
int n = 0
 
int * chip
 
int * x
 
int * y
 
struct xs_3 * local_p_xs
 
int local_nparam
 
double * local_p_abest
 
double * local_p_amin
 
double * local_p_amax
 
int * local_p_aname
 
ann_all_par * local_p_all_par
 
DOUBLE p_obsx [10000]
 
DOUBLE p_obsy [10000]
 
DOUBLE p_obsf [10000]
 
DOUBLE * p_wl
 
DOUBLE ** ref
 
int p_obsarm [10000]
 
int p_obsorder [10000]
 
int sp_array [10000]
 
int * p_chipmod
 
int size
 
int mm
 
static unsigned int r250_buffer [250]
 
static int r250_index
 
static long int the_quotient = LONG_MAX / 16807L
 
static long int the_remainder = LONG_MAX % 16807L
 
static long int seed_val = 1L
 
static SimAnneal s
 

xsh_util_model_SPF_create

creates the model Spectral Format table corresponding to the best found model configuration

Parameters
xsh_config_annealframe of annealed model configuration parameters
xsh_instrumentinstrument instrument ARM setting
Returns
output Spectral Format Table corresponding to model configuration
static cpl_frame * xsh_util_model_SPF_create (cpl_frame *config_frame, xsh_instrument *instrument)
 

Detailed Description

This recipe Compute optimum config given wavelengths and observed detected positions See man-page for details.

This recipe is a wrapper which calls the model kernel to generate simulated 2D data. IT IS FOR TEST PURPOSES ONLY

This recipe is used to generate the model configuration file. See man-page for details.

This recipe is used to generate the physical model products. See man-page for details.

Physical model random CPU time computation functions See man-page for details.

Physical model metric computation See man-page for details.

Physical model random generator See man-page for details.

Physical model Simulated Annealing functions See man-page for details.

Macro Definition Documentation

◆ ALL_BITS [1/2]

#define ALL_BITS   0x7fffffffL

Definition at line 94 of file xsh_model_r250.c.

◆ ALL_BITS [2/2]

#define ALL_BITS   0xffffffff

Definition at line 59 of file xsh_model_randlcg.c.

◆ BIG_VAL

#define BIG_VAL   400000.0

Definition at line 72 of file xsh_model_metric.c.

◆ BITS

#define BITS   31

Definition at line 79 of file xsh_model_r250.c.

◆ HALF_RANGE

#define HALF_RANGE   0x20000000L

Definition at line 95 of file xsh_model_r250.c.

◆ HUGE

#define HUGE   HUGE_VAL

Definition at line 79 of file xsh_model_sa.c.

◆ MSB

#define MSB   0x40000000L

Definition at line 93 of file xsh_model_r250.c.

◆ PI

#define PI   3.1415626536

Definition at line 83 of file xsh_model_sa.c.

◆ PI2

#define PI2   (PI/2.0)

Definition at line 87 of file xsh_model_sa.c.

◆ RECIPE_AUTHOR [1/3]

#define RECIPE_AUTHOR   "P. Bristow"

Definition at line 75 of file xsh_model_compute.c.

◆ RECIPE_AUTHOR [2/3]

#define RECIPE_AUTHOR   "A.Modigliani, P. Bristow"

Definition at line 60 of file xsh_util_guess_xy.c.

◆ RECIPE_AUTHOR [3/3]

#define RECIPE_AUTHOR   "A.Modigliani, P. Bristow"

Definition at line 59 of file xsh_util_physmod.c.

◆ RECIPE_CONTACT [1/3]

#define RECIPE_CONTACT   "bristowp@eso.org"

Definition at line 76 of file xsh_model_compute.c.

◆ RECIPE_CONTACT [2/3]

#define RECIPE_CONTACT   "amodigli@eso.org"

Definition at line 61 of file xsh_util_guess_xy.c.

◆ RECIPE_CONTACT [3/3]

#define RECIPE_CONTACT   "amodigli@eso.org"

Definition at line 60 of file xsh_util_physmod.c.

◆ RECIPE_ID [1/3]

#define RECIPE_ID   "xsh_model_compute"

Definition at line 74 of file xsh_model_compute.c.

◆ RECIPE_ID [2/3]

#define RECIPE_ID   "xsh_util_guess_xy"

Definition at line 59 of file xsh_util_guess_xy.c.

◆ RECIPE_ID [3/3]

#define RECIPE_ID   "xsh_util_physmod"

Definition at line 58 of file xsh_util_physmod.c.

◆ STEP

#define STEP   7

Definition at line 96 of file xsh_model_r250.c.

◆ uniform [1/2]

#define uniform (   a,
  b 
)    ( a + (b - a) * xsh_dr250() )

Definition at line 66 of file xsh_model_metric.c.

◆ uniform [2/2]

#define uniform (   a,
  b 
)    ( a + (b - a) * xsh_dr250() )

Definition at line 75 of file xsh_model_sa.c.

◆ WORD_BIT

#define WORD_BIT   32

Definition at line 80 of file xsh_model_r250.c.

Function Documentation

◆ cpl_plugin_get_info()

int cpl_plugin_get_info ( cpl_pluginlist *  list)

Build the list of available plugins, for this module.

Parameters
listthe plugin list
Returns
0 if everything is ok, -1 otherwise

Create the recipe instance and make it available to the application using the interface. This function is exported.

Parameters
listthe plugin list
Returns
0 iff everything is ok

This function is exported.

Definition at line 93 of file xsh_model_anneal.c.

References xsh_get_license(), xsh_model_anneal_create(), xsh_model_anneal_description, xsh_model_anneal_description_short, xsh_model_anneal_destroy(), and xsh_model_anneal_exec().

◆ equilibrate()

static int equilibrate ( float  t,
int  n 
)
static

Definition at line 108 of file xsh_model_sa.c.

References SimAnneal::dimension, SimAnneal::func, n, SimAnneal::range, SimAnneal::rho, s, uniform, SimAnneal::x, SimAnneal::xbest, SimAnneal::xnew, SimAnneal::y, and SimAnneal::ybest.

Referenced by xsh_SAanneal(), and xsh_SAmelt().

◆ get_cpu_time()

void get_cpu_time ( double *  usertime,
double *  systime 
)

Definition at line 101 of file xsh_model_cputime.c.

Referenced by xsh_report_cpu().

◆ get_seed()

long get_seed ( void  )

Definition at line 71 of file xsh_model_randlcg.c.

References seed_val.

◆ r250()

unsigned int r250 ( void  )

Definition at line 176 of file xsh_model_r250.c.

References r250_buffer, and r250_index.

◆ xsh_3_assign()

void xsh_3_assign ( int  loc,
double  val 
)

Definition at line 540 of file xsh_model_metric.c.

References xs_3::ca_x0, xs_3::ca_x1, xs_3::ca_y0, xs_3::ca_y1, xs_3::chiprot, xs_3::chipx, xs_3::chipy, xs_3::cmup1, xs_3::d2_x1, xs_3::d2_x2, xs_3::d2_x3, xs_3::d2_y1x0, xs_3::d2_y1x1, xs_3::d2_y1x2, xs_3::d2_y1x3, xs_3::d2_y2x0, xs_3::d2_y2x1, xs_3::d2_y2x2, xs_3::d2_y2x3, xs_3::d2_y3x0, xs_3::d2_y3x1, xs_3::d2_y3x2, xs_3::d2_y3x3, DEG2RAD, xs_3::es_s, xs_3::es_w, xs_3::es_x, xs_3::es_y, xs_3::fcol, xs_3::fdet, xs_3::flipx, xs_3::flipy, local_p_all_par, local_p_xs, xs_3::mud, xs_3::mues, xs_3::mug, xs_3::mup1, xs_3::mup2, xs_3::mup3, xs_3::mup4, xs_3::mup5, xs_3::mup6, xs_3::nud, xs_3::nues, xs_3::nug, xs_3::nup1, xs_3::nup2, xs_3::nup3, xs_3::nup4, xs_3::nup5, xs_3::nup6, xs_3::offx, xs_3::offy, xs_3::pc4_x_x2y2, xs_3::pc4_x_x3y, xs_3::pc4_x_x4, xs_3::pc4_x_xy3, xs_3::pc4_x_y4, xs_3::pc4_y_x2y2, xs_3::pc4_y_x3y, xs_3::pc4_y_x4, xs_3::pc4_y_xy3, xs_3::pc4_y_y4, xs_3::pc_x_x1, xs_3::pc_x_x2y, xs_3::pc_x_x3, xs_3::pc_x_xx, xs_3::pc_x_xy, xs_3::pc_x_y1, xs_3::pc_x_y2x, xs_3::pc_x_y3, xs_3::pc_x_yy, xs_3::pc_y_x1, xs_3::pc_y_x2y, xs_3::pc_y_x3, xs_3::pc_y_xx, xs_3::pc_y_xy, xs_3::pc_y_y1, xs_3::pc_y_y2x, xs_3::pc_y_y3, xs_3::pc_y_yy, xs_3::pix, xs_3::pix_X, xs_3::pix_Y, xs_3::sg, xs_3::slit, xs_3::slit_scale, xs_3::t_ir_p2, xs_3::t_ir_p3, xs_3::taud, xs_3::taues, xs_3::taug, xs_3::taup1, xs_3::taup2, xs_3::taup3, xs_3::taup4, xs_3::taup5, xs_3::taup6, and xs_3::temper.

Referenced by xsh_3_energy().

◆ xsh_3_energy()

float xsh_3_energy ( double *  a)

Definition at line 342 of file xsh_model_metric.c.

References xs_3::arm, BIG_VAL, xs_3::chippix, xs_3::es_y, xs_3::es_y_tot, local_nparam, local_p_abest, local_p_all_par, local_p_amax, local_p_amin, local_p_aname, local_p_xs, mm, xs_3::morder_max, xs_3::morder_min, xs_3::nug, p_obsf, p_obsorder, p_obsx, p_obsy, p_wl, ref, xs_3::sg, size, xs_3::slit, xs_3::slit_scale, sp_array, xs_3::temper, xs_3::xpospix, xsh_3_assign(), xsh_3_detpix(), xsh_3_eval(), xsh_3_init(), xsh_msg, xsh_SAiterations(), and xs_3::ypospix.

Referenced by xsh_model_anneal_comp().

◆ xsh_3_output_data()

void xsh_3_output_data ( double *  a)

Definition at line 295 of file xsh_model_metric.c.

References xs_3::es_y, xs_3::es_y_tot, local_p_xs, mm, p_obsarm, p_obsf, p_obsorder, p_obsx, p_obsy, p_wl, ref, size, xs_3::slit, xs_3::slit_scale, sp_array, xs_3::xpospix, xsh_3_detpix(), xsh_3_eval(), xsh_3_init(), and xs_3::ypospix.

Referenced by xsh_model_anneal_comp().

◆ xsh_dr250()

double xsh_dr250 ( void  )

Definition at line 199 of file xsh_model_r250.c.

References ALL_BITS, r250_buffer, and r250_index.

◆ xsh_model()

static int xsh_model ( cpl_parameterlist *  parlist,
cpl_frameset *  frameset 
)
static

Interpret the command line options and execute the data processing.

Parameters
parlistthe parameters list
framesetthe frames list

In case of failure the cpl_error_code is set.

Definition at line 245 of file xsh_model_compute.c.

References check, check_msg, instrument, XSH_ARM_NIR, XSH_ARM_UVB, XSH_ARM_VIS, xsh_find_model_testpar(), xsh_find_model_wavelist(), xsh_instrument_free(), xsh_instrument_new(), xsh_instrument_set_arm(), and xsh_model_reduce().

Referenced by xsh_model_exec().

◆ xsh_model_anneal()

static int xsh_model_anneal ( cpl_parameterlist *  parlist,
cpl_frameset *  frameset 
)
static

Interpret the command line options and execute the data processing.

Parameters
parlistthe parameters list
framesetthe frames list
Returns
0 if everything is ok

Definition at line 208 of file xsh_model_anneal.c.

References check, instrument, XSH_ARM_NIR, XSH_ARM_UVB, XSH_ARM_VIS, xsh_find_calpro_model_config(), xsh_find_calpro_model_meas_coord(), xsh_instrument_free(), xsh_instrument_new(), xsh_instrument_set_arm(), xsh_model_anneal_reduce(), and xsh_model_anneal_save().

Referenced by xsh_model_anneal_exec().

◆ xsh_model_anneal_comp()

cpl_table * xsh_model_anneal_comp ( ann_all_par *  p_all_par,
int  nparam,
double *  abest,
double *  amin,
double *  amax,
int *  aname,
struct xs_3 *  p_xs_3,
int  DS_size,
coord *  msp_coord,
DOUBLE *  p_wlarray,
DOUBLE **  ref_ind,
int  maxit 
)

Use the simulated annealing algorithm to adjust the model parameters so that the metric (mean Euclidean residual) is minimised.

Parameters
p_all_parPointer to structure of parameters to be optimised
nparamNumber of parameters to be optimised
abestArray of initial guess values
aminArray of lower limit values
amaxArray of upper limit values
anameArray of parameter names
p_xs_3Model parameter structure
DS_sizeNumber of wavelengths
msp_coordStructure containing measured positions
p_wlarraypointer to the array containing the list of wavelengths
ref_indRefractive index
maxitMaximum number of iterations
Returns
conf_tab Table of optimised parameters

Definition at line 122 of file xsh_model_metric.c.

References coord::arm, check, coord::flux, local_nparam, local_p_abest, local_p_all_par, local_p_amax, local_p_amin, local_p_aname, local_p_xs, NO_VALUE, coord::order, p_obsarm, p_obsf, p_obsorder, p_obsx, p_obsy, p_wl, ref, size, coord::slit_pos, sp_array, coord::x, xsh_3_energy(), xsh_3_output_data(), xsh_model_io_output_cfg(), xsh_report_cpu(), xsh_SAanneal(), xsh_SABoltzmann(), xsh_SAcurrent(), xsh_SAfree(), xsh_SAInit(), xsh_SAinitial(), xsh_SAlearning_rate(), xsh_SAmelt(), xsh_SAtemperature(), and coord::y.

Referenced by xsh_model_anneal_reduce(), xsh_model_first_anneal(), and xsh_model_pipe_anneal().

◆ xsh_model_anneal_create()

static int xsh_model_anneal_create ( cpl_plugin *  plugin)
static

Setup the recipe options

Parameters
pluginthe plugin
Returns
0 if everything is ok

Defining the command-line/configuration parameters for the recipe.

Definition at line 126 of file xsh_model_anneal.c.

References assure, and xsh_init().

Referenced by cpl_plugin_get_info().

◆ xsh_model_anneal_destroy()

static int xsh_model_anneal_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 187 of file xsh_model_anneal.c.

Referenced by cpl_plugin_get_info().

◆ xsh_model_anneal_exec()

static int xsh_model_anneal_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 168 of file xsh_model_anneal.c.

References xsh_model_anneal().

Referenced by cpl_plugin_get_info().

◆ xsh_model_anneal_save()

static int xsh_model_anneal_save ( const cpl_table *  out_table,
cpl_parameterlist *  parlist,
cpl_frameset *  set 
)
static

Save the product of the recipe.

Parameters
out_tablethe table
parlistthe input list of parameters
setthe input frame set
Returns
0 if everything is ok, -1 otherwise

Definition at line 312 of file xsh_model_anneal.c.

References XSH_MOD_CFG.

Referenced by xsh_model_anneal().

◆ xsh_model_create()

static int xsh_model_create ( cpl_plugin *  plugin)
static

Setup the recipe options.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Create the recipe instance and make it available to the application using the interface.

Definition at line 160 of file xsh_model_compute.c.

References xsh_init().

◆ xsh_model_destroy()

static int xsh_model_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 222 of file xsh_model_compute.c.

◆ xsh_model_exec()

static int xsh_model_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 202 of file xsh_model_compute.c.

References xsh_model().

◆ xsh_model_first_anneal_create()

static int xsh_model_first_anneal_create ( cpl_plugin *  plugin)
static

Setup the recipe options

Parameters
pluginthe plugin
Returns
0 if everything is ok

Defining the command-line/configuration parameters for the recipe.

Definition at line 98 of file xsh_model_first_anneal.c.

References assure, and xsh_init().

◆ xsh_model_first_anneal_destroy()

static int xsh_model_first_anneal_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 166 of file xsh_model_first_anneal.c.

◆ xsh_model_first_anneal_exec()

static int xsh_model_first_anneal_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 if everything is ok

Definition at line 147 of file xsh_model_first_anneal.c.

References xsh_model_first_anneal().

◆ xsh_model_reduce()

static int xsh_model_reduce ( const char *  wave_list_file,
const char *  test_par_file 
)
static

The actual model computation takes place here.

Parameters
wave_list_fileinput line list filename
test_par_fileinput test model cfg filename
Returns
0 if everything is ok, -1 in error case

Definition at line 309 of file xsh_model_compute.c.

References xs_3::arm, xs_3::ASIZE, xs_3::blaze_pad, xs_3::BSIZE, xsh_order::cenpoly, check, check_msg, xs_3::chippix, xs_3::chipxpix, xs_3::chipypix, cknull, endy, xsh_order::endy, xs_3::es_s, xs_3::es_w, xs_3::es_x, xs_3::es_y, xs_3::es_y_tot, xs_3::grat_alpha, xs_3::grat_beta, instrument, xsh_order_list::list, M_PI, xs_3::morder, xs_3::morder_max, xs_3::morder_min, NIR_ASIZE, NIR_BSIZE, NIR_chipxpix, NIR_chipypix, NIR_morder, NIR_morder_max, NIR_morder_min, NIR_SIZE, xs_3::nug, XSH_INSTRCONFIG::ny, ny, xs_3::pix, xs_3::pix_X, xs_3::pix_Y, xs_3::sg, xsh_order_list::size, xs_3::SIZE, xs_3::slit_scale, starty, xsh_order::starty, xs_3::t_ir_p2, xs_3::temper, UVB_ASIZE, UVB_BSIZE, UVB_chipxpix, UVB_chipypix, UVB_morder, UVB_morder_max, UVB_morder_min, UVB_SIZE, VIS_ASIZE, VIS_BSIZE, VIS_chipxpix, VIS_chipypix, VIS_morder, VIS_morder_max, VIS_morder_min, VIS_SIZE, x, xs_3::xpospix, xsh_3_detpix(), xsh_3_eval(), xsh_3_init(), xsh_alloc1Darray(), xsh_alloc1Darray_INT(), xsh_alloc2Darray(), XSH_ARCLIST_TABLE_COLNAME_FLUX, XSH_ARCLIST_TABLE_COLNAME_WAVELENGTH, XSH_ARM_NIR, XSH_ARM_UVB, XSH_ARM_VIS, XSH_ASSURE_NOT_NULL, xsh_copy2D_to_1D(), XSH_DEBUG_LEVEL_MEDIUM, xsh_debug_level_set(), xsh_error_dump, xsh_free2Darray(), xsh_free_frame(), xsh_instrument_free(), xsh_instrument_get_arm(), xsh_instrument_get_config(), xsh_instrument_new(), xsh_instrument_set_arm(), xsh_instrument_set_binx(), xsh_instrument_set_biny(), xsh_instrument_set_mode(), XSH_MOD_CFG_NIR, XSH_MOD_CFG_UVB, XSH_MOD_CFG_VIS, XSH_MODE_IFU, xsh_model_binxy(), xsh_model_config_load_best(), xsh_model_get_xy(), xsh_model_io_output_cfg_txt(), xsh_model_locus(), xsh_model_maps_create(), xsh_model_order_edges_tab_create(), xsh_model_refining_detect(), xsh_model_spectralformat_create(), xsh_model_THE_create(), xsh_msg, xsh_order_list_free(), xsh_order_list_load(), XSH_ORDERS_NIR, XSH_ORDERS_UVB, XSH_ORDERS_VIS, xsh_pfits_get_pcatg(), xsh_ref_ind_read(), XSH_TABLE_FREE, XSH_TABLE_LOAD, y, and xs_3::ypospix.

Referenced by xsh_model().

◆ xsh_r250_init()

void xsh_r250_init ( int  sd)

Definition at line 120 of file xsh_model_r250.c.

References ALL_BITS, BITS, HALF_RANGE, MSB, r250_buffer, r250_index, STEP, xsh_randlcg(), and xsh_set_seed().

Referenced by xsh_SAInit().

◆ xsh_randlcg()

unsigned long int xsh_randlcg ( void  )

Definition at line 77 of file xsh_model_randlcg.c.

References seed_val, the_quotient, and the_remainder.

Referenced by xsh_r250_init().

◆ xsh_report_cpu()

void xsh_report_cpu ( FILE *  fp,
char *  str 
)

Definition at line 72 of file xsh_model_cputime.c.

References get_cpu_time().

Referenced by xsh_model_anneal_comp().

◆ xsh_SAanneal()

float xsh_SAanneal ( int  iters)

Definition at line 431 of file xsh_model_sa.c.

References SimAnneal::dimension, SimAnneal::dwell, equilibrate(), SimAnneal::func, SimAnneal::K, SimAnneal::maxit, n, SimAnneal::range, SimAnneal::rho, s, SimAnneal::t0, SimAnneal::tscale, uniform, SimAnneal::x, SimAnneal::xbest, SimAnneal::xnew, SimAnneal::y, and SimAnneal::ybest.

Referenced by xsh_model_anneal_comp().

◆ xsh_SABoltzmann()

float xsh_SABoltzmann ( float  k)

Definition at line 267 of file xsh_model_sa.c.

References SimAnneal::K, and s.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAcurrent()

void xsh_SAcurrent ( double *  xc)

Definition at line 345 of file xsh_model_sa.c.

References SimAnneal::dimension, s, and SimAnneal::x.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAdwell()

int xsh_SAdwell ( int  m)

Definition at line 252 of file xsh_model_sa.c.

References SimAnneal::dwell, m, and s.

◆ xsh_SAfree()

void xsh_SAfree ( void  )

Definition at line 227 of file xsh_model_sa.c.

References SimAnneal::dimension, s, SimAnneal::x, SimAnneal::xbest, and SimAnneal::xnew.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAInit()

int xsh_SAInit ( CostFunction  f,
int  d 
)

Definition at line 191 of file xsh_model_sa.c.

References SimAnneal::c_jump, SimAnneal::dimension, SimAnneal::dt, SimAnneal::dwell, SimAnneal::func, HUGE, SimAnneal::K, SimAnneal::maxit, PI2, SimAnneal::range, SimAnneal::rho, s, SimAnneal::t0, SimAnneal::tscale, SimAnneal::x, SimAnneal::xbest, SimAnneal::xnew, xsh_r250_init(), SimAnneal::y, and SimAnneal::ybest.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAinitial()

void xsh_SAinitial ( double *  xi)

Definition at line 333 of file xsh_model_sa.c.

References SimAnneal::dimension, s, and SimAnneal::x.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAiterations()

int xsh_SAiterations ( int  m)

Definition at line 239 of file xsh_model_sa.c.

References m, SimAnneal::maxit, and s.

Referenced by xsh_3_energy().

◆ xsh_SAjump()

float xsh_SAjump ( float  j)

Definition at line 306 of file xsh_model_sa.c.

References SimAnneal::c_jump, and s.

◆ xsh_SAlearning_rate()

float xsh_SAlearning_rate ( float  r)

Definition at line 293 of file xsh_model_sa.c.

References SimAnneal::rho, and s.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAmelt()

float xsh_SAmelt ( int  iters)

Definition at line 375 of file xsh_model_sa.c.

References SimAnneal::c_jump, SimAnneal::dimension, SimAnneal::dt, SimAnneal::dwell, equilibrate(), SimAnneal::func, SimAnneal::maxit, n, SimAnneal::range, SimAnneal::rho, s, SimAnneal::t0, uniform, SimAnneal::x, SimAnneal::xbest, SimAnneal::y, and SimAnneal::ybest.

Referenced by xsh_model_anneal_comp().

◆ xsh_SAoptimum()

void xsh_SAoptimum ( double *  xb)

Definition at line 358 of file xsh_model_sa.c.

References SimAnneal::dimension, s, and SimAnneal::xbest.

◆ xsh_SArange()

float xsh_SArange ( float  r)

Definition at line 319 of file xsh_model_sa.c.

References SimAnneal::range, and s.

◆ xsh_SAtemperature()

float xsh_SAtemperature ( float  t)

Definition at line 280 of file xsh_model_sa.c.

References s, and SimAnneal::t0.

Referenced by xsh_model_anneal_comp().

◆ xsh_set_seed()

long xsh_set_seed ( long int  sd)

Definition at line 66 of file xsh_model_randlcg.c.

References seed_val.

Referenced by xsh_r250_init().

◆ xsh_util_genconfig()

static int xsh_util_genconfig ( cpl_parameterlist *  parlist,
cpl_frameset *  framelist 
)
static

The FITS file creation occurs here.

Parameters
parlistthe list of parameters.
framelistthe frames list
Returns
0 iff everything is ok The recipe expects a text file and will create a FITS file out of it.

Definition at line 191 of file xsh_util_genconfig.c.

References XSH_COL_MODEL_CONF_BEST, XSH_COL_MODEL_CONF_FLAG, XSH_COL_MODEL_CONF_HIGH, XSH_COL_MODEL_CONF_LOW, XSH_COL_MODEL_CONF_NAME, and xsh_util_genconfig_save().

Referenced by xsh_util_genconfig_exec().

◆ xsh_util_genconfig_create()

static int xsh_util_genconfig_create ( cpl_plugin *  plugin)
static

Setup the recipe options

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Create the recipe instance and make it available to the application using the interface.

Definition at line 128 of file xsh_util_genconfig.c.

◆ xsh_util_genconfig_destroy()

static int xsh_util_genconfig_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 169 of file xsh_util_genconfig.c.

◆ xsh_util_genconfig_exec()

static int xsh_util_genconfig_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 150 of file xsh_util_genconfig.c.

References xsh_util_genconfig().

◆ xsh_util_genconfig_save()

static int xsh_util_genconfig_save ( cpl_table *  out_table,
cpl_parameterlist *  parlist,
cpl_frameset *  set 
)
static

Save the product of the recipe.

Parameters
out_tablethe table
parlistthe input list of parameters
setthe input frame set
Returns
0 if everything is ok, -1 otherwise

Definition at line 280 of file xsh_util_genconfig.c.

References XSH_MOD_CFG.

Referenced by xsh_util_genconfig().

◆ xsh_util_guess_xy()

static int xsh_util_guess_xy ( cpl_parameterlist *  parameters,
cpl_frameset *  frameset 
)
static

The FITS file creation occurs here.

Parameters
parametersthe list of parameters.
framesetthe frames list
Returns
0 iff everything is ok The recipe expects a text file and will create a FITS file out of it.

Definition at line 228 of file xsh_util_guess_xy.c.

References binx, biny, check, instrument, RECIPE_ID, s, x, XSH_ARC_LINE_LIST, xsh_begin(), xsh_find_frame_with_tag(), xsh_free_frameset(), xsh_instrument_free(), XSH_MOD_CFG, xsh_model_binxy(), xsh_model_config_load_best(), xsh_model_get_xy(), xsh_msg, xsh_util_guess_xy_description_short, and y.

Referenced by xsh_util_guess_xy_exec().

◆ xsh_util_guess_xy_create()

static int xsh_util_guess_xy_create ( cpl_plugin *  plugin)
static

Setup the recipe options

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Create the recipe instance and make it available to the application using the interface.

Definition at line 138 of file xsh_util_guess_xy.c.

References check, RECIPE_ID, xsh_init(), xsh_parameters_decode_bp(), and xsh_parameters_generic().

◆ xsh_util_guess_xy_destroy()

static int xsh_util_guess_xy_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 206 of file xsh_util_guess_xy.c.

◆ xsh_util_guess_xy_exec()

static int xsh_util_guess_xy_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 187 of file xsh_util_guess_xy.c.

References xsh_util_guess_xy().

◆ xsh_util_model_SPF_create()

static cpl_frame * xsh_util_model_SPF_create ( cpl_frame *  config_frame,
xsh_instrument *  instrument 
)
static

Definition at line 396 of file xsh_util_physmod.c.

References check, instrument, xsh_frame_product(), xsh_free_frame(), XSH_GET_TAG_FROM_ARM, xsh_model_config_load_best(), xsh_model_spectralformat_create(), xsh_msg_error, xsh_print_rec_status(), and XSH_SPECTRAL_FORMAT.

Referenced by xsh_util_physmod().

◆ xsh_util_physmod()

static int xsh_util_physmod ( cpl_parameterlist *  parameters,
cpl_frameset *  frameset 
)
static

The FITS file creation occurs here.

Parameters
parametersthe list of parameters.
framesetthe frames list
Returns
0 iff everything is ok The recipe expects a text file and will create a FITS file out of it.

Definition at line 248 of file xsh_util_physmod.c.

References binx, biny, check, instrument, RECIPE_ID, xsh_add_product_image(), xsh_add_product_table(), XSH_ARC_LINE_LIST, xsh_begin(), xsh_create_model_map(), xsh_find_frame_with_tag(), XSH_FREE, xsh_free_frame(), xsh_free_frameset(), XSH_GET_TAG_FROM_ARM, xsh_instrument_free(), xsh_instrument_set_binx(), xsh_instrument_set_biny(), XSH_MOD_CFG, XSH_PREFIX, XSH_SLIT_MAP, XSH_THEO_TAB_IFU, xsh_util_model_SPF_create(), xsh_util_physmod_description_short, xsh_util_physmod_model_THE_create(), and XSH_WAVE_MAP.

Referenced by xsh_util_physmod_exec().

◆ xsh_util_physmod_create()

static int xsh_util_physmod_create ( cpl_plugin *  plugin)
static

Setup the recipe options

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Create the recipe instance and make it available to the application using the interface.

Definition at line 142 of file xsh_util_physmod.c.

References check, RECIPE_ID, xsh_init(), xsh_parameters_decode_bp(), and xsh_parameters_generic().

◆ xsh_util_physmod_destroy()

static int xsh_util_physmod_destroy ( cpl_plugin *  plugin)
static

Destroy what has been created by the 'create' function.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 226 of file xsh_util_physmod.c.

◆ xsh_util_physmod_exec()

static int xsh_util_physmod_exec ( cpl_plugin *  plugin)
static

Execute the plugin instance given by the interface.

Parameters
pluginthe plugin
Returns
0 iff everything is ok

Definition at line 207 of file xsh_util_physmod.c.

References xsh_util_physmod().

Variable Documentation

◆ chip

int* chip

Definition at line 78 of file xsh_model_metric.c.

◆ local_nparam

int local_nparam

Definition at line 82 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_abest

double* local_p_abest

Definition at line 83 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_all_par

ann_all_par* local_p_all_par

Definition at line 87 of file xsh_model_metric.c.

Referenced by xsh_3_assign(), xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_amax

double* local_p_amax

Definition at line 85 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_amin

double* local_p_amin

Definition at line 84 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_aname

int* local_p_aname

Definition at line 86 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), and xsh_model_anneal_comp().

◆ local_p_xs

struct xs_3* local_p_xs

Definition at line 81 of file xsh_model_metric.c.

Referenced by xsh_3_assign(), xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ mm

int mm

Definition at line 94 of file xsh_model_metric.c.

Referenced by date_to_double(), xsh_3_energy(), xsh_3_output_data(), and xsh_detect_continuum().

◆ n

int n = 0

Definition at line 77 of file xsh_model_metric.c.

◆ p_chipmod

int* p_chipmod

Definition at line 93 of file xsh_model_metric.c.

◆ p_obsarm

int p_obsarm[10000]

Definition at line 92 of file xsh_model_metric.c.

Referenced by xsh_3_output_data(), and xsh_model_anneal_comp().

◆ p_obsf

DOUBLE p_obsf[10000]

Definition at line 89 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ p_obsorder

int p_obsorder[10000]

Definition at line 92 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ p_obsx

DOUBLE p_obsx[10000]

Definition at line 89 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ p_obsy

DOUBLE p_obsy[10000]

Definition at line 89 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ p_wl

DOUBLE* p_wl

Definition at line 90 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ r250_buffer

unsigned int r250_buffer[250]
static

Definition at line 113 of file xsh_model_r250.c.

Referenced by r250(), xsh_dr250(), and xsh_r250_init().

◆ r250_index

int r250_index
static

Definition at line 114 of file xsh_model_r250.c.

Referenced by r250(), xsh_dr250(), and xsh_r250_init().

◆ ref

DOUBLE** ref

Definition at line 91 of file xsh_model_metric.c.

Referenced by expand_region(), xsh_3_energy(), xsh_3_output_data(), xsh_dfs_check_binning(), xsh_model_anneal_comp(), xsh_model_open_param(), and xsh_vector_extract_range().

◆ s

SimAnneal s
static

Definition at line 99 of file xsh_model_sa.c.

Referenced by create_gaussian_profile(), data_wavesol_fit_with_sigma(), equilibrate(), expb_df(), fitngauss(), main(), theo_tab_filter(), theo_tab_model(), xsh_build_ifu_cube(), xsh_cfg_recover_linear_ext(), xsh_compute_resampling_accuracy(), xsh_compute_wavelength_resampling_accuracy(), xsh_fit_spline2(), xsh_frame_spectrum_save(), xsh_free_stats(), xsh_gsl_fit_gaussian(), xsh_image_3d_write_fits_header(), xsh_monitor_spectrum1D_flux_qc(), xsh_object_localize(), xsh_phys_spectrum_save(), xsh_SAanneal(), xsh_SABoltzmann(), xsh_SAcurrent(), xsh_SAdwell(), xsh_SAfree(), xsh_SAInit(), xsh_SAinitial(), xsh_SAiterations(), xsh_SAjump(), xsh_SAlearning_rate(), xsh_SAmelt(), xsh_SAoptimum(), xsh_SArange(), xsh_SAtemperature(), xsh_spectrum1D_free(), xsh_spectrum1D_get_errs(), xsh_spectrum1D_get_flux(), xsh_spectrum1D_get_lambda_max(), xsh_spectrum1D_get_lambda_min(), xsh_spectrum1D_get_lambda_step(), xsh_spectrum1D_get_qual(), xsh_spectrum1D_get_size(), xsh_spectrum1D_save(), xsh_spectrum_free(), xsh_spectrum_get_errs(), xsh_spectrum_get_errs_ima(), xsh_spectrum_get_flux(), xsh_spectrum_get_flux_ima(), xsh_spectrum_get_lambda_max(), xsh_spectrum_get_lambda_min(), xsh_spectrum_get_lambda_step(), xsh_spectrum_get_qual(), xsh_spectrum_get_qual_ima(), xsh_spectrum_get_size(), xsh_spectrum_get_size_lambda(), xsh_spectrum_get_size_slit(), xsh_spectrum_save(), xsh_spectrum_save_order(), xsh_spectrum_to_table(), xsh_star_flux_list_to_frame(), xsh_string_tolower(), xsh_string_toupper(), xsh_stringcat_any(), xsh_stringdup(), xsh_telluric_model_eval(), xsh_util_guess_xy(), and xsh_util_ifu_build_cube().

◆ seed_val

long int seed_val = 1L
static

Definition at line 64 of file xsh_model_randlcg.c.

Referenced by get_seed(), xsh_randlcg(), and xsh_set_seed().

◆ size

int size

Definition at line 94 of file xsh_model_metric.c.

Referenced by clean_arclist_data(), create_sky_mask(), data_wavesol_fit_with_sigma(), espda_create_line_table(), irplib_fill_table_DETWINUIT(), irplib_imagelist_subtract_values(), irplib_table_create_column(), lambda_fit(), main(), save_pos_x(), tab_minmax_get_index(), test_xsh_bpm2tab(), theo_tab_filter(), theo_tab_model(), xsh_3_energy(), xsh_3_output_data(), xsh_afcthetab_create(), xsh_arclist_clean_from_list(), xsh_arclist_clean_from_list_not_flagged(), xsh_arclist_get_wavelength(), xsh_arclist_is_rejected(), xsh_arclist_reject(), xsh_arclist_restore(), xsh_array_clip_mean(), xsh_array_clip_median(), xsh_array_clip_poly1d(), xsh_atmos_ext_dump_ascii(), xsh_atmos_ext_list_create(), xsh_badpixelmap_count_range_pixels(), xsh_badpixelmap_count_sat_pixels(), xsh_bspline_fit_smooth_data(), xsh_bspline_fit_smooth_data2(), xsh_cfg_recover_add_peaks_xpos(), xsh_cfg_recover_guess_tab_corr_by_ordpos(), xsh_cfg_recover_measure_tab_xy_peaks(), xsh_code_is_in_qual(), xsh_compute_absorp(), xsh_compute_ron_mbias(), xsh_compute_scale_tab(), xsh_compute_scale_tab2(), xsh_compute_scale_tab3(), xsh_compute_slit_index(), xsh_correct_scale(), xsh_correct_scale_w(), xsh_correl_spectra(), xsh_count_crh(), xsh_count_satpix(), xsh_crea_grid_from_mask(), xsh_create_dispersol_physmod(), xsh_create_master_bias2(), xsh_create_order_table(), xsh_create_poly_wavemap(), xsh_detect_order_edge(), xsh_detect_slitlet_ratio(), xsh_detmon_bpixs(), xsh_detmon_lg_find_dits_ndits(), xsh_dfs_filter(), xsh_dfs_tag_check(), xsh_dispersol_list_add(), xsh_dispersol_list_new(), xsh_find_cosmics(), xsh_find_image_scale_factors(), xsh_flag_cosmic_debug(), xsh_frameset_average(), xsh_frameset_average_pre(), xsh_gauss_gen(), xsh_gfit_tests(), xsh_grid_create(), xsh_gsl_fit_gaussian(), xsh_gsl_init_gaussian_fit(), xsh_image_3d_save(), xsh_image_create_model_image(), xsh_image_divide_1D(), xsh_image_find_barycenter(), xsh_image_fit_spline(), xsh_image_to_vector(), xsh_iml_merge_avg(), xsh_iml_merge_wgt(), xsh_irplib_imagelist_get_clean_mean_levels(), xsh_linetilt_list_get_deltay(), xsh_linetilt_list_get_orders(), xsh_linetilt_list_get_posx(), xsh_linetilt_list_get_posy(), xsh_linetilt_list_get_pre_posy(), xsh_linetilt_list_get_sigma_y(), xsh_linetilt_list_get_slit_index(), xsh_linetilt_list_get_slits(), xsh_linetilt_list_get_wavelengths(), xsh_linetilt_list_new(), xsh_mark_tell(), xsh_model_anneal_comp(), xsh_model_compute_residuals(), xsh_model_pipe_anneal(), xsh_molecfit_correct(), xsh_monitor_spectrum1D_flux_qc(), xsh_opt_extract_orders(), xsh_order_edge_list_fit(), xsh_order_list_create(), xsh_order_list_fit(), xsh_order_list_get_endy(), xsh_order_list_get_index_by_absorder(), xsh_order_list_get_starty(), xsh_order_list_merge(), xsh_order_list_new(), xsh_pfits_combine_headers(), xsh_pre_abs(), xsh_pre_data_window_median_flux_pa(), xsh_pre_frameset_subtract_frame(), xsh_prepare(), xsh_property_dump(), xsh_qual2tab(), xsh_qual2tab_frames(), xsh_qual_to_cpl_mask(), xsh_rec_list_create(), xsh_rec_list_create_with_size(), xsh_rec_list_load(), xsh_rec_list_load_eso(), xsh_rec_list_load_eso_1d(), xsh_rec_list_set_data_size(), xsh_rectify_orders(), xsh_reindex(), xsh_reindex_float(), xsh_reindex_int(), xsh_remove_cosmics(), xsh_resid_order_create(), xsh_resid_order_load(), xsh_resid_tab_create(), xsh_resid_tab_create_not_flagged(), xsh_resid_tab_load(), xsh_resid_tab_save(), xsh_select_line_core(), xsh_shift_offsettab(), xsh_sort(), xsh_spectralformat_list_create(), xsh_spectralformat_list_get_orders(), xsh_spectralformat_list_load(), xsh_spectrum_correct(), xsh_spectrum_load(), xsh_spectrum_load_order(), xsh_spectrum_to_table(), xsh_star_flux_list_create(), xsh_star_flux_list_divide(), xsh_star_flux_list_dump_ascii(), xsh_star_flux_list_duplicate(), xsh_star_flux_list_extrapolate_wave_end(), xsh_star_flux_list_save(), xsh_star_flux_list_save_order(), xsh_star_flux_list_to_frame(), xsh_std_star_spectra_to_vector_range(), xsh_stringcat_any(), xsh_subtract_sky_nod(), xsh_table_resample_uniform(), xsh_test_create_frame(), xsh_the_map_create(), xsh_the_map_get_detx(), xsh_the_map_get_dety(), xsh_the_map_get_order(), xsh_the_map_get_slit_index(), xsh_the_map_get_slit_position(), xsh_the_map_get_wavelength(), xsh_tools_get_median_double(), xsh_tools_get_statistics(), xsh_tools_min_max(), xsh_tools_running_median_1d_get_max(), xsh_tools_tchebitchev_transform_tab(), xsh_util_afc(), xsh_util_frameset_collapse_mean(), xsh_utils_compute_airm(), xsh_utils_compute_airm_eff(), xsh_vector_divide_poly(), xsh_vector_fit_slope(), xsh_vector_integrate(), xsh_vector_supersample(), xsh_vector_to_image(), xsh_wavemap_lambda_range(), xsh_wavemap_list_create(), xsh_wavemap_list_set_max_size(), xsh_wavesol_compute(), xsh_wavesol_residual(), and xsh_wavesol_trace().

◆ sp_array

int sp_array[10000]

Definition at line 92 of file xsh_model_metric.c.

Referenced by xsh_3_energy(), xsh_3_output_data(), and xsh_model_anneal_comp().

◆ the_quotient

long int the_quotient = LONG_MAX / 16807L
static

Definition at line 61 of file xsh_model_randlcg.c.

Referenced by xsh_randlcg().

◆ the_remainder

long int the_remainder = LONG_MAX % 16807L
static

Definition at line 62 of file xsh_model_randlcg.c.

Referenced by xsh_randlcg().

◆ vectordim

const int vectordim =4
static

Definition at line 103 of file xsh_model_compute.c.

◆ x

int* x

Definition at line 79 of file xsh_model_metric.c.

Referenced by add_noisy_pixel_to_ascii_file(), clean_arclist_data(), create_gaussian_profile(), deriv(), derivative_x(), detect_centroid(), do_interpolation(), esp_det_line(), esp_fit_lcont(), esp_spec_deriv(), expb_df(), expb_f(), expb_fdf(), find_left_right_continuum_pos(), find_tilt(), fitngauss(), get_lambda(), get_max_pos(), get_meas_coordinates(), init_interpolate(), irplib_tools_ipow(), irplib_vector_transform_mean(), linear_interpol(), lines_filter_by_sn(), main(), myfunc(), qc_dlinfunc(), qc_linfunc(), test_gsl_example(), xsh_afcthetab_create(), xsh_aperture_string_to_double(), xsh_bspline_fit_smooth(), xsh_bspline_fit_smooth_data(), xsh_bspline_fit_smooth_data2(), xsh_build_ifu_cube(), xsh_cfg_recover_gen_xyg(), xsh_cfg_recover_linear_ext(), xsh_cfg_recover_measure_line_xy(), xsh_cfg_recover_remove_blends(), xsh_compute_scale(), xsh_compute_scale_tab(), xsh_compute_scale_tab2(), xsh_compute_scale_tab3(), xsh_crea_grid_from_mask(), xsh_create_dispersol_physmod(), xsh_create_master_flat_with_mask(), xsh_create_poly_wavemap(), xsh_define_gauss_profile(), xsh_detect_arclines(), xsh_detect_arclines_dan(), xsh_detect_continuum(), xsh_detect_edges(), xsh_detect_max_y(), xsh_detmon_compute_badpixmap(), xsh_detmon_lg_add_empty_image(), xsh_detmon_lg_check_before_gain(), xsh_detmon_lg_qc_med(), xsh_detmon_lg_qc_ptc(), xsh_detmon_lg_reduce_all(), xsh_detmon_lin(), xsh_dispersol_list_to_slitmap(), xsh_dispersol_list_to_wavemap(), xsh_dump_table_on_region_file(), xsh_fill_bkg_mask_range(), xsh_fit_gaussian(), xsh_flat_merge_qth_d2(), xsh_flat_merge_qth_d2_smooth(), xsh_gauss_gen(), xsh_gen_lowpass(), xsh_generate_interpolation_kernel(), xsh_generate_tanh_kernel(), xsh_grid_add(), xsh_gsl_bspline_non_uniform(), xsh_gsl_fit_gaussian(), xsh_image_generate_background(), xsh_interpol(), xsh_iterpol_linear(), xsh_max_double(), xsh_max_int(), xsh_min_double(), xsh_min_int(), xsh_model_first_anneal(), xsh_model_get_xy(), xsh_model_reduce(), xsh_normalize_spectrum_image(), xsh_object_localize(), xsh_opt_extract_orders(), xsh_poisson_random(), xsh_polynomial_derivative_1d(), xsh_polynomial_evaluate_1d(), xsh_pow_int(), xsh_pre_add_scalar(), xsh_pre_data_window_median_flux_pa(), xsh_pre_divide_scalar(), xsh_pre_from_raw_get(), xsh_pre_multiply_scalar(), xsh_pre_subtract_scalar(), xsh_round_double(), xsh_show_interpolation_kernel(), xsh_sinc(), xsh_spectralformat_check_wlimit(), xsh_spline_hermite(), xsh_spline_hermite_table(), xsh_star_flux_list_extrapolate_wave_end(), xsh_subtract_sky_at_pix(), xsh_subtract_sky_at_pix2(), xsh_subtract_sky_on_obj_at_pix(), xsh_util_afc(), xsh_util_efficiency(), xsh_util_guess_xy(), xsh_util_ifu_build_cube(), xsh_vector_fit_gaussian(), xsh_vector_integrate(), xsh_warp_image_generic(), xsh_wavemap_lambda_range(), xsh_wavemap_list_eval_lambda(), xsh_wavemap_list_save(), and xsh_wavemap_list_save2().

◆ xsh_model_anneal_description

char xsh_model_anneal_description[]
static
Initial value:
=
"This recipe is for development use only.\n"

Definition at line 75 of file xsh_model_anneal.c.

Referenced by cpl_plugin_get_info().

◆ xsh_model_anneal_description_short

char xsh_model_anneal_description_short[]
static
Initial value:
=
"Compute optimum config given wavelengths and observed detected positions"

Definition at line 77 of file xsh_model_anneal.c.

Referenced by cpl_plugin_get_info().

◆ xsh_model_compute_description

char xsh_model_compute_description[]
static
Initial value:
=
"This recipe is for development use only.\n"

Definition at line 98 of file xsh_model_compute.c.

◆ xsh_model_compute_description_short

char xsh_model_compute_description_short[] = "Development Only"
static

Definition at line 96 of file xsh_model_compute.c.

◆ xsh_model_first_anneal_description

char xsh_model_first_anneal_description[]
static
Initial value:
=
"Facilatates a first appro phys mod fit using interactively derived list of wavelengths and centroids.\n"

Definition at line 47 of file xsh_model_first_anneal.c.

◆ xsh_model_first_anneal_description_short

char xsh_model_first_anneal_description_short[]
static
Initial value:
=
"Compute optimum config given wavelengths and observed detected positions"

Definition at line 49 of file xsh_model_first_anneal.c.

◆ xsh_util_genconfig_description

char xsh_util_genconfig_description[]
static
Initial value:
=
"This recipe is used to generate the model configuration file.\n"
"The sof file contains the names of the input ASCII file\n"
"tagged with "XSH_UTIL_GENCONFIG_RAW".\n"
"The ASCII file must contain five columns:\n"
"1st: The best guess value\n"
"2nd: The low limit\n"
"3th: The high limit\n"
"4th: The Flag to recompute or not\n"
"5th: Name of the Parameter\n"
"The ASCII files are in the catalogs/ directory of the XSH distribution.\n"
"This recipe produces 1 file:\n"
"First product: the table with the configuration for the model.\n"
" (PRO CATG = XSH_MOD_CFG_TAB_ARM)\n"
XSH_UTIL_GENCONFIG_RAW
#define XSH_UTIL_GENCONFIG_RAW
Definition: xsh_dfs.h:1298

Definition at line 66 of file xsh_util_genconfig.c.

◆ xsh_util_guess_xy_description

char xsh_util_guess_xy_description[]
static
Initial value:
=
"This recipe finds X-Y guesses corresponding to 'grating_order','wavelength','slit' as in input tab. \n"
"The sof file contains the names of the input FITS file\n"
"tagged with XSH_MOD_CFG_arm.\n"
"tagged with ARC_LINE_LIST_arm.\n"
"This recipe has the following products:\n"
"Model predictions (PRO CATG = MOD_arm)\n"

Definition at line 81 of file xsh_util_guess_xy.c.

◆ xsh_util_guess_xy_description_short

char xsh_util_guess_xy_description_short[] ="Generate physical model guesses"
static

Definition at line 89 of file xsh_util_guess_xy.c.

Referenced by xsh_util_guess_xy().

◆ xsh_util_physmod_description

char xsh_util_physmod_description[]
static
Initial value:
=
"This recipe generates the theoretical and the spectral format tables. \n"
"and possibly the model based wave map.\n"
"The sof file contains the names of the input FITS file\n"
"tagged with XSH_MOD_CFG_TAB_arm.\n"
"tagged with ARC_LINE_LIST_arm.\n"
"This recipe has the following products:\n"
"Model order traces for nine pinholes (PRO CATG = THEO_TAB_MULT_arm)\n"
"Model order traces for nine pinholes (PRO CATG = THEO_TAB_IFU_arm)\n"
"Model order traces for central pinhole (PRO CATG = THEO_TAB_SING_arm)\n"
"Spectral format table (PRO CATG = SPECTRAL_FORMAT_TAB_arm)\n"
"Wave map image (PRO CATG = WAVE_MAP_arm)\n"
"Slit map image (PRO CATG = SLIT_MAP_arm)\n"

Definition at line 79 of file xsh_util_physmod.c.

◆ xsh_util_physmod_description_short

char xsh_util_physmod_description_short[] ="Generate physical model products"
static

Definition at line 93 of file xsh_util_physmod.c.

Referenced by xsh_util_physmod().

◆ y

int* y

Definition at line 80 of file xsh_model_metric.c.

Referenced by add_noisy_pixel_to_ascii_file(), clean_arclist_data(), create_gaussian_profile(), cumulate_qc_parameter(), deriv(), derivative_y(), detect_centroid(), do_interpolation(), esp_det_line(), esp_fit_lcont(), esp_spec_deriv(), esp_spec_smooth(), expb_f(), find_left_right_continuum_pos(), fitngauss(), get_lambda(), get_max_pos(), get_meas_coordinates(), lambda_fit(), lines_filter_by_sn(), main(), poly_fitn(), test_gsl_example(), xsh_afcthetab_create(), xsh_bspline_fit_smooth(), xsh_bspline_fit_smooth_data(), xsh_bspline_fit_smooth_data2(), xsh_build_ifu_cube(), xsh_center_cube(), xsh_cfg_recover_gen_xyg(), xsh_cfg_recover_measure_line_xy(), xsh_cfg_recover_remove_blends(), xsh_compute_flat_edges(), xsh_compute_scale(), xsh_compute_scale_tab(), xsh_compute_scale_tab2(), xsh_compute_scale_tab3(), xsh_crea_grid_from_mask(), xsh_create_blaze(), xsh_create_dispersol_physmod(), xsh_create_master_flat_with_mask(), xsh_create_poly_wavemap(), xsh_data_interpolate(), xsh_define_gauss_profile(), xsh_detect_arclines(), xsh_detect_arclines_dan(), xsh_detect_continuum(), xsh_detect_edges(), xsh_detect_max_y(), xsh_detect_order_edge(), xsh_detmon_lg_add_empty_image(), xsh_detmon_lg_check_before_gain(), xsh_detmon_lg_qc_med(), xsh_detmon_lg_qc_ptc(), xsh_detmon_lg_reduce_all(), xsh_detmon_lin(), xsh_dispersol_list_to_slitmap(), xsh_dispersol_list_to_wavemap(), xsh_dump_table_on_region_file(), xsh_fill_bkg_mask_range(), xsh_fit_gaussian(), xsh_flat_merge_qth_d2(), xsh_flat_merge_qth_d2_smooth(), xsh_gen_lowpass(), xsh_grid_add(), xsh_gsl_bspline_non_uniform(), xsh_image_generate_background(), xsh_iterpol_linear(), xsh_max_double(), xsh_max_int(), xsh_min_double(), xsh_min_int(), xsh_model_first_anneal(), xsh_model_get_xy(), xsh_model_reduce(), xsh_object_localize(), xsh_opt_extract_orders(), xsh_order_list_eval(), xsh_order_list_eval_int(), xsh_polynomial_regression_2d(), xsh_pow_int(), xsh_pre_data_window_median_flux_pa(), xsh_pre_from_raw_get(), xsh_spline_hermite(), xsh_spline_hermite_table(), xsh_subtract_sky_at_pix(), xsh_subtract_sky_at_pix2(), xsh_subtract_sky_on_obj_at_pix(), xsh_table_get_interpolated(), xsh_table_interpolate(), xsh_util_afc(), xsh_util_guess_xy(), xsh_util_ifu_build_cube(), xsh_vector_fit_gaussian(), xsh_vector_integrate(), xsh_warp_image_generic(), xsh_wavemap_lambda_range(), xsh_wavemap_list_eval_lambda(), xsh_wavemap_list_save(), xsh_wavemap_list_save2(), xsh_wavesol_compute(), and xsh_wavesol_residual().

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