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| static void | xsh_nullmatrix (mat A) |
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| static void | xsh_nullvector (vec a) |
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| static void | xsh_copyvector (vec a, vec b) |
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| static const char * | xsh_get_tag_opt_mod_cfg (xsh_xs_3 *p_xs_3, int rec_id) |
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| static cpl_error_code | xsh_model_compute_residuals (xsh_xs_3 *p_xs_3, coord *msp_coord, DOUBLE *p_wlarray, DOUBLE **ref_ind, const int size, const int annealed, cpl_propertylist *resid_header, cpl_frame *resid_frame, cpl_propertylist **result) |
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| void | xsh_3_init (struct xs_3 *p_xs_3) |
| | Pre-compute a number of non-wavelength dependent secondary parameters required by the model.
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| void | xsh_3_eval (DOUBLE lambda, int morder, DOUBLE **ref_ind, struct xs_3 *p_xs_3) |
| | Compute the physical x,y position at the detector array for a given wavelength, order and parameter configuration.
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| void | xsh_3_detpix (struct xs_3 *p_xs_3) |
| | Takes the physical x,y position at the detector array and converts this to a pixel position.
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| void | xsh_ref_ind_read_old (const char *ref_ind_file, DOUBLE **ref_ind, DOUBLE temper) |
| | Load the refractive index array for a given arm and temperature. This old routine is only retained to allow easy testing of new refractive index data.
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| void | xsh_ref_ind_read (int arm, DOUBLE **ref_ind_T, DOUBLE temper) |
| | Load the refractive index coeffs for a given arm and temperature.
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| int * | xsh_alloc1Darray_INT (int asize) |
| | allocates memory for an array of integers
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| DOUBLE * | xsh_alloc1Darray (int asize) |
| | allocates memory for an array of doubles
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| double ** | xsh_alloc2Darray (int asize, int bsize) |
| | allocates memory for a 2D array of doubles
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| float ** | xsh_alloc2Darray_f (int asize, int bsize) |
| | allocates memory for a 2D array of floats
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| int ** | xsh_alloc2Darray_i (int asize, int bsize) |
| | allocates memory for a 2D array of integers
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| int | xsh_free2Darray (double **ccdtemp, int asize) |
| | free memory for a 2D array of doubles
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| int | xsh_free2Darray_i (int **ccdtemp, int asize) |
| | free memory for a 2D array of integers
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| int | xsh_free2Darray_f (float **ccdtemp, int asize) |
| | free memory for a 2D array of floats
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| double * | xsh_copy2D_to_1D (double **ccdtemp, int asize, int bsize) |
| | copy 2D to 1D array
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| double ** | xsh_copy1D_to_2D (double *oneDccdtemp, int asize, int bsize) |
| | copy 1D to 2D array
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| double *** | xsh_alloc3Darray2 (int asize, int bsize, int csize) |
| | allocate 3D array
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| double *** | xsh_alloc3Darray (int asize, int bsize, int csize) |
| | allocate 3D array
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| int | xsh_free3Darray (double ***ccdtemp, int asize, int bsize) |
| | free 3D array
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| void | xsh_addvectors (vec a, vec b) |
| | add 2 vectors a+=b
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| void | xsh_addvectors3D (vec a, vec b) |
| | add 2 vectors a+=b
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| void | xsh_subtractvectors (vec a, vec b) |
| | subtract 2 vectors a-=b
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| DOUBLE | xsh_scalarproduct (vec a, vec b) |
| | implements scalar product
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| void | xsh_multiply (vec a, DOUBLE k) |
| | applies scalar product to vector
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| void | xsh_showvector (vec a) |
| | show vector content
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| void | xsh_normz (vec a) |
| | normalize vector
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| void | xsh_normall (vec a) |
| | normalize vector
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| void | xsh_multiplymatrix (mat A, mat B, mat C) |
| | multiply three matrixes A=B*C
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| void | xsh_multiplythreematrix (mat A, mat B, mat C, mat D) |
| | multiply three matrixes A=B*C*D
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| void | xsh_showmatrix (mat A) |
| | Show matrix.
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| void | xsh_initializematrix (mat A) |
| | initialize matrix A
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| void | xsh_matrixforvector (vec a, mat B, vec c) |
| | Realize a*B*c.
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| void | xsh_transpose (mat A, mat B) |
| | matrix transposal
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| void | xsh_rotationmatrix (mat A, const char axis, const DOUBLE angle) |
| | matrix rotation
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| void | xsh_rotin (mat A, const DOUBLE x_angle, const DOUBLE y_angle, const DOUBLE z_angle) |
| | matrix rotation
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| double | xsh_physmod_grating (vec in, int m, double sg, mat in_rot, mat exit_rot, vec out) |
| | Calculate the new vector after a given incident vector is reflected in a prism (i.e. exits from the same surface than it entered through)
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| void | xsh_refract (vec b, DOUBLE rind, vec a) |
| | Calculate the new vector after a given incident vector passes a boundary between two materials.
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| static cpl_error_code | xsh_model_compute_slitmap_kw (const double slit_min, const double slit_max, xsh_xs_3 *p_xs_3, xsh_instrument *instr, cpl_propertylist **plist) |
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| cpl_error_code | xsh_model_maps_create (xsh_xs_3 *p_xs_3, xsh_instrument *instr, const char *wtag, const char *stag, cpl_frame **wmap_frame, cpl_frame **smap_frame, const int save_tmp) |
| | Compute the wavelength and slit maps.
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| int | xsh_model_map_ifu (double xifu, double yifu, xsh_xs_3 *p_xs_3) |
| | Map the IFU position to spectrograph slit position using transformation provided by Ana for IFU2.
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| cpl_vector ** | xsh_model_locus (struct xs_3 *p_xs_3, xsh_instrument *instr, double ent_slit_pos) |
| | Compute the locus of the spectrum.
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| void | xsh_model_get_xy (xsh_xs_3 *p_xs_3, xsh_instrument *instr, double lambda_nm, int morder, double ent_slit_pos, double *x, double *y) |
| | Compute the detector location (floating point pixels) of a given wavelength/entrance slit position.
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| void | xsh_model_binxy (xsh_xs_3 *p_xs_3, int bin_X, int bin_Y) |
| | corrects model for detector's binning
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| cpl_frame * | xsh_model_spectralformat_create (xsh_xs_3 *p_xs_3, const char *tab_filename) |
| | creates the model spectral format table
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| cpl_frame * | xsh_model_THE_create (xsh_xs_3 *p_xs_3, xsh_instrument *instr, const char *line_list, int num_ph, double sep_ph, const char *THE_filename) |
| | Compute the THE table (centroid for each feature in lamp spectrum)
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| cpl_frame * | xsh_model_pipe_anneal (cpl_frame *cfg_frame, cpl_frame *resid_frame, int maxit, double ann_fac, int scenario, int rec_id) |
| | Run the annealing (optimisation) algoritm to improve the fit of the model parameter set to a given wavecal exposure.
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| int | xsh_model_open_param (char *listname, char *findname, int *ref, int setref, double *best, double setbest, double *min, double *max, double gfac, double fac, int counter) |
| | Open a parameter in the model config structure for annealing and set the limits.
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| double | xsh_model_sellmeier_ext (int arm, double temper, double lam_sqr) |
| | Get the refractive index for a given temperature and wavelength from the (hard coded) extended Sellmeier co-efficients for infrasil (NIR) and Silica (UVB)
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| double | xsh_model_ref_ind_air (double temper, double lam_sqr) |
| | Return the refractive index of air at a given wavelength and temperature.
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| cpl_vector * | xsh_model_refining_detect (const cpl_vector *in, int fwhm, double sigma, int display) |
| | Detect the brightest features in a spectrum.
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| int | xsh_model_first_anneal (cpl_parameterlist *parlist, cpl_frameset *frameset) |
| | Interpret the command line options and execute the data processing.
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| int | xsh_model_first_anneal_save (const cpl_table *out_table, xsh_instrument *instr, cpl_parameterlist *parlist, cpl_frameset *set) |
| | Save the product of the recipe.
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| int | xsh_model_offset (DOUBLE slit_pix_shift, DOUBLE disp_pix_shift, struct xs_3 *p_xs_3) |
| | convert a pixel shift measured on the detector to a shift in detector centroid
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| static int | comp_center2 (const void *one, const void *two) |
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| static void | save_centers (CENTER_ORDER *pcent, int fpos, int npos, const char *arm) |
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| void | xsh_order_edge_list_fit (xsh_order_list *list, int size, double *order, double *posx, double *posy, int deg_poly, int edge) |
| | Fit edge of an order.
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| static void | fit_order_edge_list (xsh_order_list *list, int npos, CENTER_ORDER *pcent, int degree, int edge) |
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| cpl_frame * | xsh_model_order_edges_tab_create (xsh_xs_3 *p_xs_3, const char *tab_filename) |
| | Create an order edges table using the phys mod.
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