MUSE Pipeline Reference Manual
0.18.5
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Modules
Data Structures
Files
Modules
Here is a list of all modules:
Fast Image Reconstruction
Artifact handling
Astronomical tools
Basic-processing function
Combination of images
CPL wrappers
DAR (Differential Atmospheric Refraction)
External FITS table formats
Datacube handling
Flux calibration
Geometrical calibration
Image handling for the MUSE format
Imagelist processing for the four-extension image format
Line Spread Function related functions
Protected access to FITS headers
Pixel grid
Pixel table handling
Post-processing functions
Processing framework
Quadrants and other CCD regions
Quality flag handling
Resampling
Sky subtraction
Tracing
Utilities
Wavelength calibration
World coordinate system (WCS) related functions
Xposure combination
Tool muse_badpix_from_ascii
muse_badpix_from_ascii
: Convert an ASCII list to a BADPIX_TABLE
Tool muse_badpix_from_dq
muse_badpix_from_dq
: Convert the DQ image extension to a BADPIX_TABLE
Tool muse_badpix_from_region
muse_badpix_from_region
: Convert a region to a BADPIX_TABLE
Tool muse_fill_image
muse_fill_image
: fill a MUSE three-extension image with constant(s)
Tool muse_geo_plot
muse_geo_plot
: Plot the contents of a MUSE geometry table
Tool muse_image_fwhm
imuse_mage_fwhm
: Determine FWHM on objects in a (collapsed) image
Tool muse_lsf_fwhm
muse_lsf_fwhm
: Determine FWHM of a line from given LSF
Tool muse_makeima
muse_makeima
: standalone quick image reconstruction
Tool muse_pixtable_crop
muse_pixtable_crop
: Crop a MUSE pixel table in one or more dimensions
Tool muse_pixtable_dump
muse_pixtable_dump
: Display a MUSE pixel table on the screen
Tool muse_pixtable_erase_slice
muse_pixtable_erase_slice
: Erase a slice of one IFU from a MUSE pixel table
Tool muse_trace_plot_samples
muse_trace_plot_samples
: Plot tracing sample points
Tool muse_trace_plot_widths
muse_trace_plot_widths
: Plot tracing widths
Tool muse_wave_plot_column
muse_wave_plot_column
: Plot wavelength calibration for one CCD column
Tool muse_wave_plot_residuals
muse_wave_plot_residuals
: Plot wavelength calibration residuals
Recipe muse_ampl: Determine the instrumental throughput from exposures taken with the pico-amplifier / photo diode readings.
Recipe muse_astrometry: Compute an astrometric solution.
Recipe muse_bias: Combine several separate bias images into one master bias file.
Recipe muse_create_sky: Create night sky model from selected pixels of an exposure of empty sky.
Recipe muse_dark: Combine several separate dark images into one master dark file and locate hot pixels.
Recipe muse_exp_combine: Combine several exposures into one datacube.
Recipe muse_flat: Combine several separate flat images into one master flat file, trace slice locations, and locate dark pixels.
Recipe muse_geometry: Compute relative location of the slices within the field of view and measure the instrumental PSF on the detectors.
Recipe muse_qi_mask: Create image masks for use with the quick image reconstruction.
Recipe muse_quick_image: Carry out quick image reconstruction: create an image of the field of view in the fastest possible way for a visual check of the telescope pointing.
Recipe muse_scibasic: Remove the instrumental signature from the data of each CCD and convert them from an image into a pixel table.
Recipe muse_scipost_apply_astrometry: Calibrate astrometry for MUSE pixel tables.
Recipe muse_scipost_calibrate_flux: Calibrate flux for MUSE pixel tables.
Recipe muse_scipost_combine_pixtables: Combine MUSE pixel tables, either from different IFUs, or from different exposures, or both.
Recipe muse_scipost_correct_dar: Apply DAR correction for MUSE pixel tables.
Recipe muse_scipost_make_cube: Make a MUSE cube from a MUSE pixel table.
Recipe muse_scipost_subtract_sky: Subtract night sky model.
Recipe muse_scipost: Prepare reduced and combined science products.
Recipe muse_sky_lsf: Compute the LSF
Recipe muse_skyflat: Combine several separate (twilight) sky flat-fields into one master skyflat, and compute the integrated flux within the given wavelength range of the IFU.
Recipe muse_standard: Create a flux response curve from a standard star exposure.
Recipe muse_wavecal: Detect arc emission lines and determine the wavelength solution, and optionally the LSF, for each slice.
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